RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 HSD3B1P14060 373 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 TNFRSF1BP20333 461 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 HSD3B2P26439 372 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 NTSR1P30989 418 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 E2F2Q14209 437 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 RGNQ15493 299 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 NXPE4Q6UWF7 544 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 VN1R5Q7Z5H4 357 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 SIMC1Q8NDZ2 872 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 SH3KBP1Q96B97 665 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 PHOX2BQ99453 314 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 MOSPD1Q9UJG1 213 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 PLEKHM1Q9Y4G2 1056 aa16.06■□□□□ 0.16
PHF1-202ENST00000374516 CKAP5Q14008 2032 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3DA0A087WVF3 549 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3IA0A087WXS9 549 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3EA0A087X179 549 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3KA0A087X1G2 549 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3FA6NER0 549 aaPredicted RBP16.05■□□□□ 0.16
PHF1-202ENST00000374516 GABRR3A8MPY1 467 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3LB9A6J9 549 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 RGS5O15539 181 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 EGFP01133 1207 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3HP0C7X1 549 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 COL9A1P20849 921 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TRIM23P36406 574 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 SSX1Q16384 188 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 PRAMEF14Q5SWL7 426 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 ARMC4Q5T2S8 1044 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 PRAMEF13Q5VWM6 474 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3GQ6DHY5 549 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3CQ6IPX1 549 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 DCUN1D3Q8IWE4 304 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBC1D3Q8IZP1 549 aaPredicted RBP16.05■□□□□ 0.16
PHF1-202ENST00000374516 NAGSQ8N159 534 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 IL17RCQ8NAC3 791 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TP53I13Q8NBR0 393 aaPredicted RBP16.05■□□□□ 0.16
PHF1-202ENST00000374516 EFCAB11Q9BUY7 163 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 AP1M2Q9Y6Q5 423 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 EFCAB10A6NFE3 127 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 HMX3A6NHT5 357 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TNFRSF10AO00220 468 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 SLC31A1O15431 190 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 PI15O43692 258 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 ALX3O95076 343 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 ITGA2P17301 1181 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 KELP23276 732 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 LTBRP36941 435 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 RPS19P39019 145 aaKnown RBP16.05■□□□□ 0.16
PHF1-202ENST00000374516 OR1E2P47887 323 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 CDH12P55289 794 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 RPS21P63220 83 aaKnown RBP16.05■□□□□ 0.16
PHF1-202ENST00000374516 RPA4Q13156 261 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 BAK1Q16611 211 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 EXOC3L2Q2M3D2 409 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TBRG1Q3YBR2 411 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 ARMCX6Q7L4S7 300 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 LGI4Q8N135 537 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 OR5K2Q8NHB8 316 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 REPS1Q96D71 796 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 DUSP26Q9BV47 211 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 CNPPD1Q9BV87 410 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 SLC17A9Q9BYT1 436 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 SMURF1Q9HCE7 757 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 TAC3Q9UHF0 121 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 KCNK6Q9Y257 313 aa16.05■□□□□ 0.16
PHF1-202ENST00000374516 C1orf226A1L170 272 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 MEIOCA2RUB1 952 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 PCDH7O60245 1069 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 PTX3P26022 381 aaPredicted RBP16.04■□□□□ 0.16
PHF1-202ENST00000374516 PSMB5P28074 263 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 CTHP32929 405 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 PCGF2P35227 344 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 SPIBQ01892 262 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 CHRNEQ04844 493 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 DOC2BQ14184 412 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 TCEA2Q15560 299 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 SPIN4Q56A73 249 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 ZMAT1Q5H9K5 638 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 HIST2H2AA3Q6FI13 130 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 SDE2Q6IQ49 451 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 RNF130Q86XS8 419 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 WDR34Q96EX3 536 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 TTYH2Q9BSA4 534 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 TAPBPLQ9BX59 468 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 ASPNQ9BXN1 380 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 BARHL1Q9BZE3 327 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 DMRT3Q9NQL9 472 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 PAQR5Q9NXK6 330 aaPredicted RBP16.04■□□□□ 0.16
PHF1-202ENST00000374516 SH3BP4Q9P0V3 963 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 V9GYH0 126 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 TICRRQ7Z2Z1 1910 aa16.04■□□□□ 0.16
PHF1-202ENST00000374516 GOLGA4Q13439 2230 aaKnown RBP16.04■□□□□ 0.16
PHF1-202ENST00000374516 A0A1W2PQF6 199 aa16.03■□□□□ 0.16
PHF1-202ENST00000374516 SCAMP2O15127 329 aaKnown RBP16.03■□□□□ 0.16
PHF1-202ENST00000374516 KLF8O95600 359 aaPredicted RBP16.03■□□□□ 0.16
PHF1-202ENST00000374516 OPN1SWP03999 348 aa16.03■□□□□ 0.16
PHF1-202ENST00000374516 SLC35G4P0C7Q5 338 aa16.03■□□□□ 0.16
PHF1-202ENST00000374516 HOXB2P14652 356 aa16.03■□□□□ 0.16
PHF1-202ENST00000374516 POU2F1P14859 743 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms