RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TAS2R43P59537 309 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 GLT8D1Q68CQ7 371 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 TREML1Q86YW5 311 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 RBP7Q96R05 134 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 MCOLN1Q9GZU1 580 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 HAPLN2Q9GZV7 340 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 PLEKHA3Q9HB20 300 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 ICKQ9UPZ9 632 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 MYH13Q9UKX3 1938 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 RBM47A0AV96 593 aaKnown RBP13.72□□□□□ -0.21
TRAF1-201ENST00000373887 A6NLC8 198 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CD3GP09693 182 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 NR2C1P13056 603 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 NTSR1P30989 418 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 SELENOVP59797 346 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 MVKQ03426 396 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 TUBA3CQ13748 450 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 TCEAL4Q96EI5 215 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 PHOX2BQ99453 314 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 ASB6Q9NWX5 421 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 NLGN3Q9NZ94 848 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 C19orf25Q9UFG5 118 aaPredicted RBP13.72□□□□□ -0.21
TRAF1-201ENST00000373887 EXOSC1Q9Y3B2 195 aaKnown RBP13.72□□□□□ -0.21
TRAF1-201ENST00000373887 OAS1P00973 400 aaKnown RBP13.71□□□□□ -0.21
TRAF1-201ENST00000373887 CBSLP0DN79 551 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 CTSAP10619 480 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 AKR1C4P17516 323 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 CBSP35520 551 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 PIK3CBP42338 1070 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 MAGEA6P43360 314 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 DUSP3P51452 185 aaPredicted RBP13.71□□□□□ -0.21
TRAF1-201ENST00000373887 PLP2Q04941 152 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 PTGR1Q14914 329 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 RAB6CQ53S08 254 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 KIAA1614Q5VZ46 1190 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 ZC3HC1Q86WB0 502 aaKnown RBP13.71□□□□□ -0.21
TRAF1-201ENST00000373887 TICAM1Q8IUC6 712 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 CNIH3Q8TBE1 160 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 DPCDQ9BVM2 203 aaPredicted RBP13.71□□□□□ -0.21
TRAF1-201ENST00000373887 RAB6CQ9H0N0 254 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 TP63Q9H3D4 680 aaPredicted RBP13.71□□□□□ -0.21
TRAF1-201ENST00000373887 PCDHB16Q9NRJ7 776 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 DHDHQ9UQ10 334 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 CAPN5O15484 640 aaPredicted RBP13.71□□□□□ -0.21
TRAF1-201ENST00000373887 HRGP04196 525 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 FAM163BP0C2L3 166 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 JUPP14923 745 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 OTX2P32243 289 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 TMEM151AQ8N4L1 468 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 XYLT2Q9H1B5 865 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 RPF2Q9H7B2 306 aaKnown RBP13.71□□□□□ -0.21
TRAF1-201ENST00000373887 PTGESO14684 152 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 PMM2O15305 246 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 SCO2O43819 266 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 SSX4O60224 188 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 TPPPO94811 219 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 ASGR2P07307 311 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 C6P13671 934 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 S1PR1P21453 382 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 STC1P52823 247 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 MLC1Q15049 377 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF773Q6PK81 442 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 NPAS3Q8IXF0 933 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 ARL14Q8N4G2 192 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 WDR20Q8TBZ3 569 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF675Q8TD23 568 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 PTCHD1Q96NR3 888 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 POU2F3Q9UKI9 436 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 BACE2Q9Y5Z0 518 aa13.71□□□□□ -0.21
TRAF1-201ENST00000373887 FLYWCH1Q4VC44 716 aa13.71□□□□□ -0.22
TRAF1-201ENST00000373887 SPANXN4Q5MJ08 99 aa13.71□□□□□ -0.22
TRAF1-201ENST00000373887 EEF1E1-BLOC1S5C9J1V9 151 aa13.71□□□□□ -0.22
TRAF1-201ENST00000373887 FPR1P21462 350 aa13.71□□□□□ -0.22
TRAF1-201ENST00000373887 SOX9P48436 509 aa13.71□□□□□ -0.22
TRAF1-201ENST00000373887 GLYATL2Q8WU03 294 aa13.71□□□□□ -0.22
TRAF1-201ENST00000373887 CLEC4EQ9ULY5 219 aa13.71□□□□□ -0.22
TRAF1-201ENST00000373887 hCG_1807616A0A1W2PRN6 198 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 SHOXO15266 292 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 SEMA4FO95754 770 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 APOC3P02656 99 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 FBLP22087 321 aaKnown RBP13.7□□□□□ -0.22
TRAF1-201ENST00000373887 SFT2D3Q587I9 215 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 ZDHHC24Q6UX98 284 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 KIF18BQ86Y91 864 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 STK35Q8TDR2 534 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 SLC7A11Q9UPY5 501 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
TRAF1-201ENST00000373887 DUX1O43812 170 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 SCGB2A2Q13296 93 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 CST9Q5W186 159 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 CHST14Q8NCH0 376 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 OR4K1Q8NGD4 311 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 GLYATL1Q969I3 302 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 NECTIN4Q96NY8 510 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 NEDD4LQ96PU5 975 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 PTGES2Q9H7Z7 377 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 B3GALT1Q9Y5Z6 326 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 SPEF2Q9C093 1822 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 NRXN3Q9Y4C0 1643 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 GALK2Q01415 458 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms