RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RASSF5Q8WWW0 418 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 FAM46AQ96IP4 442 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 FOXN4Q96NZ1 517 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 SLC12A9Q9BXP2 914 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 RACGAP1Q9H0H5 632 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 ARNT2Q9HBZ2 717 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 LHX3Q9UBR4 397 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF821O75541 412 aaPredicted RBP8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 FBXO45P0C2W1 286 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 BMP2P12643 396 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 CERS1P27544 350 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 ADH7P40394 386 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 SMSP52788 366 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 WDR5P61964 334 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 SHC2P98077 582 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 SQSTM1Q13501 440 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 ATXN7L3Q14CW9 347 aaPredicted RBP8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 ITPRIPL2Q3MIP1 535 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 LCN1P1Q5VSP4 162 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 LIPJQ5W064 366 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 TBPL2Q6SJ96 375 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 KLBQ86Z14 1044 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 LINC01465Q8N7H1 131 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 METTL21AQ8WXB1 218 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 TFAP2CQ92754 450 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 ZSWIM3Q96MP5 696 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 PTCHD1Q96NR3 888 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 GTPBP2Q9BX10 602 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 BHLHE41Q9C0J9 482 aaPredicted RBP8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 PCBD2Q9H0N5 130 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 USP36Q9P275 1121 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 CFL2Q9Y281 166 aa8.68□□□□□ -1.02
SMARCA1-202ENST00000371122 PCM1Q15154 2024 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 WASHC1A8K0Z3 465 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 FAM155AB1AL88 458 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 H3BMQ9 156 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 PCDH17O14917 1159 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 SCO2O43819 266 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 RNGTTO60942 597 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 CTSAP10619 480 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 APEHP13798 732 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 EDNRAP25101 427 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 BMPR1AP36894 532 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 GCGRP47871 477 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ATP4BP51164 291 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 CAV3P56539 151 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 CHAF1BQ13112 559 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 CDK5R2Q13319 367 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 RUNX3Q13761 415 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 LPAL2Q16609 132 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 FAM214AQ32MH5 1076 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF750Q32MQ0 723 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 TBC1D25Q3MII6 688 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 PGBD2Q6P3X8 592 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 WASH2PQ6VEQ5 465 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ABHD11Q8NFV4 315 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 HDAC2Q92769 488 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 COQ8BQ96D53 544 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 PEX11GQ96HA9 241 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 COG8Q96MW5 612 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 TGM7Q96PF1 710 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 CD180Q99467 661 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 SLC6A16Q9GZN6 736 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ZBTB20Q9HC78 741 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 TCF7L1Q9HCS4 588 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ARMC1Q9NVT9 282 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 KLF15Q9UIH9 416 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 GMEB2Q9UKD1 530 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 RBM7Q9Y580 266 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 UBE2QL1A1L167 161 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ANXA2P2A6NMY6 339 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 H3BNC9 293 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 PLGP00747 810 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ANXA2P07355 339 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 PIM1P11309 404 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 TIMP2P16035 220 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF12P17014 697 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 TUBA4AP68366 448 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 OC90Q02509 493 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 DSC1Q08554 894 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ST3GAL3Q11203 375 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 RGNQ15493 299 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 CST6Q15828 149 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 SYPL1Q16563 259 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 MOGQ16653 247 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 BCL7CQ8WUZ0 217 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 FGF13Q92913 245 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 GPR78Q96P69 363 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 MARK1Q9P0L2 795 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 TBC1D24Q9ULP9 559 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 PLXNB2O15031 1838 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 TCRBV21S2A2A0A5A6 115 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 OR7A17O14581 309 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 MC3RP41968 323 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 SP140Q13342 867 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 XKR4Q5GH76 650 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF627Q7L945 461 aa8.67□□□□□ -1.02
SMARCA1-202ENST00000371122 TMED4Q7Z7H5 227 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms