RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 LIM2P55344 173 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 GINS1Q14691 196 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 IDNKQ5T6J7 187 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 LYPLAL1Q5VWZ2 237 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 VRK3Q8IV63 474 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 LHFPL5Q8TAF8 219 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 FUBP3Q96I24 572 aaKnown RBP eCLIP13.68□□□□□ -0.22
PHTF1-204ENST00000369604 TAS2R7Q9NYW3 318 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 REV1Q9UBZ9 1251 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 PADI3Q9ULW8 664 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 MGAT4BQ9UQ53 548 aa13.68□□□□□ -0.22
PHTF1-204ENST00000369604 K7ERQ8 282 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 PRRG1O14668 218 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 SPAM1P38567 509 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 BDKRB1P46663 353 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 MVDP53602 400 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 C2orf80Q0P641 193 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 ZMYND11Q15326 602 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 ZNF630Q2M218 657 aaPredicted RBP13.67□□□□□ -0.22
PHTF1-204ENST00000369604 COL28A1Q2UY09 1125 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 METAP1DQ6UB28 335 aaPredicted RBP13.67□□□□□ -0.22
PHTF1-204ENST00000369604 PRSS42Q7Z5A4 293 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 ZNF366Q8N895 744 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 UCN3Q969E3 161 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 ATF6BQ99941 703 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 GKN1Q9NS71 199 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 SLC9A8Q9Y2E8 581 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 CD8B2A6NJW9 211 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 FFAR1O14842 300 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 NUPL2O15504 423 aaKnown RBP13.67□□□□□ -0.22
PHTF1-204ENST00000369604 NME6O75414 186 aaPredicted RBP13.67□□□□□ -0.22
PHTF1-204ENST00000369604 C8GP07360 202 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 CD8BP10966 210 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 CELP19835 753 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 HNF1BP35680 557 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 ATP5C1P36542 298 aaKnown RBP13.67□□□□□ -0.22
PHTF1-204ENST00000369604 NNMTP40261 264 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 SLC6A12P48065 614 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 RPS26P62854 115 aaKnown RBP13.67□□□□□ -0.22
PHTF1-204ENST00000369604 NAE1Q13564 534 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 INSL4Q14641 139 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 C9orf131Q5VYM1 1079 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 QSOX2Q6ZRP7 698 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 OR11H7Q8NGC8 314 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 PPCDCQ96CD2 204 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 PPA2Q9H2U2 334 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 LINC00597Q9H2U6 94 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 GPBP1L1Q9HC44 474 aaPredicted RBP13.67□□□□□ -0.22
PHTF1-204ENST00000369604 ENAMQ9NRM1 1142 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 C1GALT1Q9NS00 363 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 GULP1Q9UBP9 304 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 SPATA2Q9UM82 520 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 SCML1Q9UN30 329 aa13.67□□□□□ -0.22
PHTF1-204ENST00000369604 EXO1Q9UQ84 846 aaKnown RBP13.67□□□□□ -0.22
PHTF1-204ENST00000369604 GSAPA4D1B5 854 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 H3BNC9 293 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 RNASET2O00584 256 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 H1F0P07305 194 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 OR56A5P0C7T3 313 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 CBSLP0DN79 551 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SDHBP21912 280 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 CBSP35520 551 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 EPHA5P54756 1037 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 HSF2Q03933 536 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SYT14P1Q58G82 188 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 TMEM201Q5SNT2 666 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 ZNF770Q6IQ21 691 aaPredicted RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 TNFAIP8L2Q6P589 184 aaPredicted RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 FAM92BQ6ZTR7 304 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 HDDC2Q7Z4H3 204 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 ZNF280BQ86YH2 543 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SLC9A6Q92581 669 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 RNFT2Q96EX2 444 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 C1QTNF6Q9BXI9 259 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 NLNQ9BYT8 704 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 KCNN2Q9H2S1 579 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 NT5DC2Q9H857 520 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 BEX1Q9HBH7 125 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 ZFP64Q9NPA5 681 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 MRPL39Q9NYK5 338 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 GPR52Q9Y2T5 361 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 PTPRDP23468 1912 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 EEF1E1O43324 174 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 TP53P04637 393 aaPredicted RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 CXCL3P19876 107 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 DNASE1P24855 282 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SOX18P35713 384 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 NTRK2Q16620 822 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 ZSWIM7Q19AV6 140 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 TSPAN33Q86UF1 283 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 RBM45Q8IUH3 476 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 GPC2Q8N158 579 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 BEST4Q8NFU0 473 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SENP5Q96HI0 755 aaPredicted RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms