RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 LAPTM4BQ86VI4 370 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 RGL4Q8IZJ4 473 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 TCEAL3Q969E4 200 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 PARK7Q99497 189 aaKnown RBP12.49□□□□□ -0.41
NCSTN-202ENST00000368063 PTDSS2Q9BVG9 487 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 RNF32Q9H0A6 362 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 ENAMQ9NRM1 1142 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 SDC3O75056 442 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 ATG12O94817 140 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 MMP2P08253 660 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 C1SP09871 688 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 PTAFRP25105 342 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 CD86P42081 329 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 KCNJ3P48549 501 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 SRP9P49458 86 aaKnown RBP12.49□□□□□ -0.41
NCSTN-202ENST00000368063 RAG2P55895 527 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 HLXQ14774 488 aaPredicted RBP12.49□□□□□ -0.41
NCSTN-202ENST00000368063 TAF1AQ15573 450 aaPredicted RBP12.49□□□□□ -0.41
NCSTN-202ENST00000368063 TRIM46Q7Z4K8 759 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 ZNF527Q8NB42 609 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 SPPL2AQ8TCT8 520 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 KCTD13Q8WZ19 329 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 HHIPQ96QV1 700 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 TSSK6Q9BXA6 273 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 WDCPQ9H6R7 721 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 GAREM1Q9H706 876 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 LATS2Q9NRM7 1088 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 DNAJC11Q9NVH1 559 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 NLGN3Q9NZ94 848 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 RPH3AQ9Y2J0 694 aaPredicted RBP12.49□□□□□ -0.41
NCSTN-202ENST00000368063 GSTK1Q9Y2Q3 226 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 DERAQ9Y315 318 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 LCTP09848 1927 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 EFCAB7A8K855 629 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 TLR4O00206 839 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 IGHV2-70P01814 119 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 HPXP02790 462 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 ATXN1LP0C7T5 689 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 ETV5P41161 510 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 LIMS1P48059 325 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 PRMT2P55345 433 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 ZNF280AP59817 542 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 TPBGQ13641 420 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 CHRNA6Q15825 494 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 SLC36A2Q495M3 483 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 PAN3Q58A45 887 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 PDZD9Q8IXQ8 264 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 SETD7Q8WTS6 366 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 OR51M1Q9H341 326 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 IPPKQ9H8X2 491 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 SLC22A11Q9NSA0 550 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 IMP3Q9NV31 184 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 NUDT4Q9NZJ9 180 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 RPL36Q9Y3U8 105 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 ARL5AQ9Y689 179 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 NUP214P35658 2090 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 A0A0G2JPF8 293 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 C2orf78A6NCI8 922 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 HNRNPCL3B7ZW38 293 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 ZNF593O00488 134 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 CLDN5O00501 218 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 RPP40O75818 363 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 HTR3BO95264 441 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 SIX6O95475 246 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 HPP00738 406 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 HNRNPCL4P0DMR1 293 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 MC2RQ01718 297 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 CXCL9Q07325 125 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 IL17RCQ8NAC3 791 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 OR13C4Q8NGS5 318 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 OR4L1Q8NH43 312 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 NELL1Q92832 810 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 CMSS1Q9BQ75 279 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 ULBP1Q9BZM6 244 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 DDX31Q9H8H2 851 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 ZNF624Q9P2J8 865 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 MYEF2Q9P2K5 600 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 NDOR1Q9UHB4 597 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 CLCA2Q9UQC9 943 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 PCDHB7Q9Y5E2 793 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 DSPPQ9NZW4 1301 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 PRAMEF25A6NGN4 478 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 MCRIP1C9JLW8 97 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 EEF1E1O43324 174 aaKnown RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 GCM2O75603 506 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 NUDT7P0C024 238 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 SDHBP21912 280 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 GIFP27352 417 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 DGKEP52429 567 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 LYPD4Q6UWN0 246 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 UNC5DQ6UXZ4 953 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 CEACAM20Q6UY09 585 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 NAXDQ8IW45 347 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 C12orf45Q8N5I9 185 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-202ENST00000368063 EEF1AKMT1Q8WVE0 214 aa12.48□□□□□ -0.41
NCSTN-202ENST00000368063 LINGO1Q96FE5 620 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms