RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 UBTD2Q8WUN7 234 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 POF1BQ8WVV4 589 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 VOPP1Q96AW1 172 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 MAGEB10Q96LZ2 347 aaPredicted RBP18.68■□□□□ 0.58
TRIM58-201ENST00000366481 MAPKAP1Q9BPZ7 522 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 HCFC1R1Q9NWW0 138 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 PADI2Q9Y2J8 665 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 IQCMA0A1B0GVH7 501 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 ARHGEF33A8MVX0 844 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 TSPAN6O43657 245 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 TLX2O43763 284 aaPredicted RBP18.68■□□□□ 0.58
TRIM58-201ENST00000366481 RFPL3O75679 317 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 SLC16A8O95907 504 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 SEMG1P04279 462 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 HBQ1P09105 142 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 CHI3L1P36222 383 aaPredicted RBP18.68■□□□□ 0.58
TRIM58-201ENST00000366481 SNRPD1P62314 119 aaKnown RBP18.68■□□□□ 0.58
TRIM58-201ENST00000366481 ANGPT1Q15389 498 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 BCL2L15Q5TBC7 163 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 ZBTB37Q5TC79 503 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 LUZP2Q86TE4 346 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 ESX1Q8N693 406 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 RDH14Q9HBH5 336 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 TEX51A0A1B0GUA7 166 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 NCR1O76036 304 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 SCARB2Q14108 478 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 C22orf39Q6P5X5 142 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 THOC6Q86W42 341 aaKnown RBP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 MMP21Q8N119 569 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 SYNPOQ8N3V7 929 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 SMAD5Q99717 465 aaKnown RBP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 RIOK2Q9BVS4 552 aaKnown RBP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 TBC1D17Q9HA65 648 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 NMNAT1Q9HAN9 279 aaPredicted RBP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 GSTK1Q9Y2Q3 226 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 SCN5AQ14524 2016 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 SCN2BO60939 215 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 ALDH1A1P00352 501 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 SPINT3P49223 89 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 RHAGQ02094 409 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 CSTF1Q05048 431 aaKnown RBP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 SUZ12Q15022 739 aaKnown RBP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 TEAD4Q15561 434 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 GDPGP1Q6ZNW5 385 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 TMPRSS11BQ86T26 416 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 IQCF1Q8N6M8 205 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 ZNF680Q8NEM1 530 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 OVCA2Q8WZ82 227 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 CIDECQ96AQ7 238 aaPredicted RBP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 DCLRE1CQ96SD1 692 aaKnown RBP18.67■□□□□ 0.58
TRIM58-201ENST00000366481 TAPBPLQ9BX59 468 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 NCKAP1Q9Y2A7 1128 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 RWDD3Q9Y3V2 267 aa18.67■□□□□ 0.58
TRIM58-201ENST00000366481 TPST2O60704 377 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 GSTM1P09488 218 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 ACRP10323 421 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 FCN2Q15485 313 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 RNASE12Q5GAN4 147 aaKnown RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 OR2G6Q5TZ20 316 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 TIGD3Q6B0B8 471 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 Q6ZNB5 142 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 GATAD2BQ8WXI9 593 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 MRPS31Q92665 395 aaKnown RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 WDFY2Q96P53 400 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 OR4K3Q96R72 315 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 LINC00597Q9H2U6 94 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 ASIC5Q9NY37 505 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 ZNF624Q9P2J8 865 aaPredicted RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 ENOPH1Q9UHY7 261 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 FRMPD3Q5JV73 1810 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 A0A1B0GVC2 190 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 A6NIN4 97 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 TGFB1P01137 390 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 SLC6A12P48065 614 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 ZNF81P51508 661 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 LRRC70Q7Z2Q7 622 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 TMEM145Q8NBT3 493 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 TMEM175Q9BSA9 504 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 FAM120CQ9NX05 1096 aaKnown RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 RPL36Q9Y3U8 105 aaKnown RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 BACE2Q9Y5Z0 518 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 PIPSLA2A3N6 862 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 H3BUI4 141 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 SLC30A4O14863 429 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 NUPL2O15504 423 aaKnown RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 URODP06132 367 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 HOXB9P17482 250 aaPredicted RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 RPS13P62277 151 aaKnown RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 SYTL3Q4VX76 610 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 BTN2A2Q8WVV5 523 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 SORBS1Q9BX66 1292 aaKnown RBP18.66■□□□□ 0.58
TRIM58-201ENST00000366481 OR51B5Q9H339 312 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 CDCP1Q9H5V8 836 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 PRKAB1Q9Y478 270 aa18.66■□□□□ 0.58
TRIM58-201ENST00000366481 TRBC2A0A5B9 178 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 SOD2P04179 222 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 SOX9P48436 509 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 ALDH9A1P49189 494 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 CTBP2P56545 445 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms