RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CBX5P45973 191 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 ACTC1P68032 377 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 ACTA1P68133 377 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 SH2D5Q6ZV89 423 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 KCTD9Q7L273 389 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 NPAS4Q8IUM7 802 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 DPF3Q92784 378 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 OR51J1Q9H342 316 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 SCP2D1Q9UJQ7 156 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 LOC102723532A0A0G2JNH3 316 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 ICMTO60725 284 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 GTF2F2P13984 249 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 TBPL2Q6SJ96 375 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 SUSD1Q6UWL2 747 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 DCAF4L2Q8NA75 395 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 RHBDF1Q96CC6 855 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMC5-201ENST00000361138 ADAP2Q9NPF8 381 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 MRPS23Q9Y3D9 190 aaKnown RBP13.34□□□□□ -0.27
SMC5-201ENST00000361138 C8orf89P0DMQ9 161 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 ADORA3P0DMS8 318 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 S100A10P60903 97 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 VLDLRP98155 873 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 DOC2AQ14183 400 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 UAP1L1Q3KQV9 507 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 TOR1AIP1Q5JTV8 583 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 SPACA7Q96KW9 195 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 SCGB3A2Q96PL1 93 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 ZNF300Q96RE9 604 aaPredicted RBP13.34□□□□□ -0.27
SMC5-201ENST00000361138 SNX18Q96RF0 628 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 THAP7Q9BT49 309 aaPredicted RBP13.34□□□□□ -0.27
SMC5-201ENST00000361138 RBCK1Q9BYM8 510 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 BTNL2Q9UIR0 455 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 ZNF195O14628 629 aa13.33□□□□□ -0.27
SMC5-201ENST00000361138 CHP2O43745 196 aa13.33□□□□□ -0.27
SMC5-201ENST00000361138 GATBO75879 557 aaKnown RBP13.33□□□□□ -0.27
SMC5-201ENST00000361138 DDOSTP39656 456 aa13.33□□□□□ -0.27
SMC5-201ENST00000361138 RPS26P62854 115 aaKnown RBP13.33□□□□□ -0.27
SMC5-201ENST00000361138 LINC00299Q6ZSB3 139 aa13.33□□□□□ -0.27
SMC5-201ENST00000361138 CBLL1Q75N03 491 aa13.33□□□□□ -0.27
SMC5-201ENST00000361138 LOC100509620A0A075B734 347 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 METTL15A6NJ78 407 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 ANHXE9PGG2 379 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 NARSO43776 548 aaKnown RBP13.33□□□□□ -0.28
SMC5-201ENST00000361138 RBBP9O75884 186 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 TFP02787 698 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 SELPP16109 830 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 VAMP1P23763 118 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 IDUAP35475 653 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 ACVR1BP36896 505 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 CCL23P55773 120 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 CAP1Q01518 475 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 FGL1Q08830 312 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 ATXN7L3Q14CW9 347 aaPredicted RBP13.33□□□□□ -0.28
SMC5-201ENST00000361138 COL28A1Q2UY09 1125 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 SYT6Q5T7P8 510 aaPredicted RBP13.33□□□□□ -0.28
SMC5-201ENST00000361138 FAM155AB1AL88 458 aaPredicted RBP13.33□□□□□ -0.28
SMC5-201ENST00000361138 UBFD1O14562 309 aaKnown RBP13.33□□□□□ -0.28
SMC5-201ENST00000361138 LDB2O43679 373 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 MMP20O60882 483 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 SOCS5O75159 536 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 ZNF823P16415 610 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 RPL35P42766 123 aaKnown RBP13.33□□□□□ -0.28
SMC5-201ENST00000361138 CCDC58Q4VC31 144 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 ZNF783Q6ZMS7 281 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 LCN9Q8WX39 176 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 HMX1Q9NP08 348 aaPredicted RBP13.33□□□□□ -0.28
SMC5-201ENST00000361138 GPR52Q9Y2T5 361 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 A0A0U1RQF3 1178 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 A6NL46 340 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 LRRTM2O43300 516 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 C1GALT1C1LP0DN25 315 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 BMP1P13497 986 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 ULK3Q6PHR2 472 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 WASH2PQ6VEQ5 465 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 DNAJC22Q8N4W6 341 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 OR2T35Q8NGX2 323 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 HUS1BQ8NHY5 278 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 RAB3BP20337 219 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 PIGAP37287 484 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 BTN3A2P78410 334 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 LRRC37A5PQ49AS3 106 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 OR2T11Q8NH01 316 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 UBXN10Q96LJ8 280 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 UHRF1Q96T88 793 aaPredicted RBP13.33□□□□□ -0.28
SMC5-201ENST00000361138 C16orf70Q9BSU1 422 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 PSORS1C1Q9UIG5 152 aa13.33□□□□□ -0.28
SMC5-201ENST00000361138 IL1AP01583 271 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 STATHP02808 62 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 GKN3PP0CG01 181 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 RAB5BP61020 215 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 SLC44A3Q8N4M1 653 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 SUN3Q8TAQ9 357 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 PLEKHA1Q9HB21 404 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 FBXL3Q9UKT7 428 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 SH2B3Q9UQQ2 575 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 E7EQ34 232 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 GOSR2O14653 212 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 OR3A3P47888 321 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 OR3A2P47893 321 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms