RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ZFP36L1Q07352 338 aaKnown RBP8.65□□□□□ -1.03
UPF2-202ENST00000357604 PCDH1Q08174 1060 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 IHHQ14623 411 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 FAM174BQ3ZCQ3 159 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 C6orf136Q5SQH8 315 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 MTFR2Q6P444 385 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 ISLR2Q6UXK2 745 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 SHISA6Q6ZSJ9 500 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 LARP4Q71RC2 724 aaKnown RBP eCLIP8.65□□□□□ -1.03
UPF2-202ENST00000357604 MTDHQ86UE4 582 aaKnown RBP8.65□□□□□ -1.03
UPF2-202ENST00000357604 AGGF1Q8N302 714 aaeCLIP8.65□□□□□ -1.036e-9■■■■□ 24.9
UPF2-202ENST00000357604 METTL25Q8N6Q8 603 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 LINC01555Q8NAE3 123 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 B3GNT7Q8NFL0 401 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 WDR83Q9BRX9 315 aaKnown RBP8.65□□□□□ -1.03
UPF2-202ENST00000357604 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 ADNPQ9H2P0 1102 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 ASIC5Q9NY37 505 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 ADAM21Q9UKJ8 722 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 DAPP1Q9UN19 280 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 TRAV17A0A0B4J275 112 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 PLGP00747 810 aaPredicted RBP8.65□□□□□ -1.03
UPF2-202ENST00000357604 MSL3P1P0C860 447 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 CSF2RBP32927 897 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 GABRA3P34903 492 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 SLC6A8P48029 635 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 RCAN2Q14206 197 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 ZNF425Q6IV72 752 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 TMEM107Q6UX40 140 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 VASH2Q86V25 355 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 PIK3C3Q8NEB9 887 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 PNPLA2Q96AD5 504 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 MARK4Q96L34 752 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 CDCP1Q9H5V8 836 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 DDX31Q9H8H2 851 aaKnown RBP8.65□□□□□ -1.03
UPF2-202ENST00000357604 SPAG4Q9NPE6 437 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 STMN3Q9NZ72 180 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 YARS2Q9Y2Z4 477 aaKnown RBP8.65□□□□□ -1.03
UPF2-202ENST00000357604 TMEM184BQ9Y519 407 aaPredicted RBP8.65□□□□□ -1.03
UPF2-202ENST00000357604 GLOD5A6NK44 160 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 ZNF682O95780 498 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 SERPINA7P05543 415 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 BCKDHAP12694 445 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 PGCP20142 388 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 MMP11P24347 488 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 FBXO42Q6P3S6 717 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 ANKRD37Q7Z713 158 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 WDR60Q8WVS4 1066 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 UCN3Q969E3 161 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 ZNF597Q96LX8 424 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 MMADHCQ9H3L0 296 aaPredicted RBP8.64□□□□□ -1.03
UPF2-202ENST00000357604 MAT2BQ9NZL9 334 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 TMEM9Q9P0T7 183 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 MAGEL2Q9UJ55 1249 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 FBXL4Q9UKA2 621 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 EDARQ9UNE0 448 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 KLK4Q9Y5K2 254 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 TRIOBPQ9H2D6 2365 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 DENND4CQ5VZ89 1909 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 TEX51A0A1B0GUA7 166 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 RTCAO00442 366 aaKnown RBP8.64□□□□□ -1.03
UPF2-202ENST00000357604 ITM2AO43736 263 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 NR2C1P13056 603 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 CHRNB3Q05901 458 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 FADDQ13158 208 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 TIGD2Q4W5G0 525 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 VWA5B1Q5TIE3 1220 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 FBXW10Q5XX13 1052 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 DNAJC14Q6Y2X3 702 aaPredicted RBP8.64□□□□□ -1.03
UPF2-202ENST00000357604 RNF165Q6ZSG1 346 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 TRPM8Q7Z2W7 1104 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 TRIM46Q7Z4K8 759 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 SPATA24Q86W54 205 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 CHTF18Q8WVB6 975 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 FIG4Q92562 907 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 ACPTQ9BZG2 426 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 P4HTMQ9NXG6 502 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 SEC14L3Q9UDX4 400 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 ERVK-19Q9WJR5 959 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 NRP2O60462 931 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 G6PDP11413 515 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 GCAP28676 217 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 PGM1P36871 562 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 HTR3AP46098 478 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 CFHR1Q03591 330 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 MED21Q13503 144 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 RTP5Q14D33 572 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 C1orf146Q5VVC0 180 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 CDCP2Q5VXM1 449 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 FRMPD2BQ6IN97 320 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 SLC48A1Q6P1K1 146 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 AAGABQ6PD74 315 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 HDDC2Q7Z4H3 204 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 NAA11Q9BSU3 229 aaPredicted RBP8.64□□□□□ -1.03
UPF2-202ENST00000357604 KCNN2Q9H2S1 579 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 POLE3Q9NRF9 147 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 SAMD4AQ9UPU9 718 aaKnown RBP8.64□□□□□ -1.03
UPF2-202ENST00000357604 A0A096LPI6 279 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 LRRC14BA6NHZ5 514 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 B2RBV5 119 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms