RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 LIPKQ5VXJ0 399 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 FAM26EQ8N5C1 309 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 ZNF366Q8N895 744 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 LINC00615Q96LM1 132 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-202ENST00000352393 POLDIP3Q9BY77 421 aaKnown RBP23.25■■□□□ 1.31
CPNE1-202ENST00000352393 SERHL2Q9H4I8 314 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 HCN2Q9UL51 889 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 RTCAO00442 366 aaKnown RBP23.24■■□□□ 1.31
CPNE1-202ENST00000352393 PRKYO43930 277 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 LGI1O95970 557 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 BSGP35613 385 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 GSTM5P46439 218 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 PCBP4P57723 403 aaKnown RBP23.24■■□□□ 1.31
CPNE1-202ENST00000352393 SMIM11AP58511 58 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 TARDBPQ13148 414 aaKnown RBP eCLIP23.24■■□□□ 1.31
CPNE1-202ENST00000352393 GLYR1Q49A26 553 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-202ENST00000352393 SLC25A30Q5SVS4 291 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 IQCF1Q8N6M8 205 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 KREMEN2Q8NCW0 462 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 SMPDL3AQ92484 453 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 RHBGQ9H310 441 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 DPEP2Q9H4A9 486 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 SAGE1Q9NXZ1 904 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 A4GNTQ9UNA3 340 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 CARNS1A5YM72 827 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 IL1AP01583 271 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 HSPB3Q12988 150 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 TEAD2Q15562 447 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 OR52I1Q8NGK6 324 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 RASSF5Q8WWW0 418 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 MSLNLQ96KJ4 702 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 MS4A8Q9BY19 250 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 MVB12BQ9H7P6 319 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 TXNL4BQ9NX01 149 aaKnown RBP23.24■■□□□ 1.31
CPNE1-202ENST00000352393 PLAGL1Q9UM63 463 aa23.24■■□□□ 1.31
CPNE1-202ENST00000352393 C17orf113A0A1B0GUU1 675 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 ZNF24P17028 368 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 CNTN1Q12860 1018 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 NFE2L1Q14494 772 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 CD300LDQ6UXZ3 194 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 COMTD1Q86VU5 262 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 ZNF607Q96SK3 696 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 MIXL1Q9H2W2 232 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 TDP1Q9NUW8 608 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 TVP23BQ9NYZ1 205 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 PLD2O14939 933 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 CDRT1O95170 752 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 PAPLNO95428 1278 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 RAB36O95755 333 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 GNRH1P01148 92 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 TRAPPC2P0DI81 140 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 TRAPPC2BP0DI82 140 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 CPEP16870 476 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 HYAL2Q12891 473 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 ASAH1Q13510 395 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 SPDYE7PQ495Y7 208 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 FLYWCH1Q4VC44 716 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 SYT14P1Q58G82 188 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 C6orf183Q5T699 404 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 CLDN22Q8N7P3 220 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 FGF11Q92914 225 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 CAPNS2Q96L46 248 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 MCOLN1Q9GZU1 580 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 SEC14L3Q9UDX4 400 aa23.23■■□□□ 1.31
CPNE1-202ENST00000352393 TESQ9UGI8 421 aaKnown RBP23.23■■□□□ 1.31
CPNE1-202ENST00000352393 A0A1W2PRQ8 180 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 NME6O75414 186 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-202ENST00000352393 MOSPD3O75425 235 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 POP7O75817 140 aaKnown RBP23.22■■□□□ 1.31
CPNE1-202ENST00000352393 TNNI3P19429 210 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 PPM1AP35813 382 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 RPS5P46782 204 aaKnown RBP23.22■■□□□ 1.31
CPNE1-202ENST00000352393 GJA8P48165 433 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 METAP1P53582 386 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 ZNF77Q15935 545 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 PODNL1Q6PEZ8 512 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 FAM83HQ6ZRV2 1179 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-202ENST00000352393 GATAD2AQ86YP4 633 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 C2orf73Q8N5S3 287 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-202ENST00000352393 ANKRD53Q8N9V6 530 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 NUS1Q96E22 293 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 F2RL3Q96RI0 385 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 NELL2Q99435 816 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 PHOX2BQ99453 314 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 TREX2Q9BQ50 279 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-202ENST00000352393 OR52A5Q9H2C5 316 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 MARCH7Q9H992 704 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 TIGARQ9NQ88 270 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 MARK1Q9P0L2 795 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 C5AR2Q9P296 337 aa23.22■■□□□ 1.31
CPNE1-202ENST00000352393 PRAMEF27A3QJZ7 478 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 KPNA3O00505 521 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-202ENST00000352393 MSL3P1P0C860 447 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ETV5P41161 510 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ETV1P50549 477 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ZFP69Q49AA0 526 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 RAET1GQ6H3X3 334 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ZNF765Q7L2R6 523 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ANKRD33Q7Z3H0 272 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 OR2L2Q8NH16 312 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms