RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CHST10O43529 356 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 MED26O95402 600 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 MT-ND1P03886 318 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 PORP16435 677 aaPredicted RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 AQP4P55087 323 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 RPS26P62854 115 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 SNAP47Q5SQN1 464 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 FKBP9P1Q75LS8 142 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 ADAMTS18Q8TE60 1221 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 NAT6Q93015 286 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 TBC1D20Q96BZ9 403 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 ELP4Q96EB1 424 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 NAF1Q96HR8 494 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 MAGED4Q96JG8 741 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 SLC41A2Q96JW4 573 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 SPRTNQ9H040 489 aaPredicted RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 TOX3O15405 576 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 GPR75O95800 540 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 RNH1P13489 461 aaKnown RBP20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 CPMP14384 443 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 MATN1P21941 496 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 AVPR1BP47901 424 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 KHKP50053 298 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 TXNL4AP83876 142 aaKnown RBP20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 FOLH1Q04609 750 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 KCNAB1Q14722 419 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 TMEM71Q6P5X7 295 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 GALNT10Q86SR1 603 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 CIB1Q99828 191 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 NUDT22Q9BRQ3 303 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 C9orf16Q9BUW7 83 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 COQ10BQ9H8M1 238 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 GMEB2Q9UKD1 530 aa20.19■□□□□ 0.82
TSPAN3-202ENST00000346495 CABIN1Q9Y6J0 2220 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 BLACEA4D250 179 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 PCDHGA12O60330 932 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 GCM2O75603 506 aaPredicted RBP20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 IFNA14P01570 189 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 MSL3P1P0C860 447 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 AQP1P29972 269 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 PTGER1P34995 402 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 MC3RP41968 323 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 PRKAG1P54619 331 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 GPR19Q15760 415 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 LPAL2Q16609 132 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 FAM214AQ32MH5 1076 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 CYBRD1Q53TN4 286 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 PERM1Q5SV97 790 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 REEP3Q6NUK4 255 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 ZBTB49Q6ZSB9 765 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 OR4N5Q8IXE1 308 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 TMEM52Q8NDY8 209 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 OR2I1PQ8NGU4 316 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 OR51I1Q9H343 314 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 ZNF768Q9H5H4 540 aaKnown RBP20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 C8orf4Q9NR00 106 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 DNAJB9Q9UBS3 223 aa20.18■□□□□ 0.82
TSPAN3-202ENST00000346495 TMEM247A6NEH6 219 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 A8MU76 341 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 TMEM150CB9EJG8 249 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 C5orf58C9J3I9 102 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 FAM227AF5H4B4 570 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 H0YIG0 161 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 H0YJX3 145 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 HMGN4O00479 90 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 SUV39H1O43463 412 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 FGF17O60258 216 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 OR2B3O76000 313 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 ZNF26P17031 533 aaPredicted RBP20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 NELFEP18615 380 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 PPP2R1BP30154 601 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 PCBP3P57721 371 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 COL9A2Q14055 689 aaPredicted RBP20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 MYBPC3Q14896 1274 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 LTB4RQ15722 352 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 CRB2Q5IJ48 1285 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 PATL1Q86TB9 770 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 METTL25Q8N6Q8 603 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 NUP43Q8NFH3 380 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 MIPOL1Q8TD10 442 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 COL26A1Q96A83 441 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 LOXL4Q96JB6 756 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 HSH2DQ96JZ2 352 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 ZNF570Q96NI8 536 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 BTBD9Q96Q07 612 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 SERHL2Q9H4I8 314 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 NTMQ9P121 344 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 TRPC4Q9UBN4 977 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 MRPS33Q9Y291 106 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 LRCH1Q9Y2L9 728 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 ZNF451Q9Y4E5 1061 aa20.17■□□□□ 0.82
TSPAN3-202ENST00000346495 SAC3D1A6NKF1 404 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 PLOD2O00469 737 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 LDB3O75112 727 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 PRSS23O95084 383 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 CST1P01037 141 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 SEMG1P04279 462 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 TFPTP0C1Z6 253 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 CKMT2P17540 419 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms