RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 AGAP4Q96P64 663 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 BBS4Q96RK4 519 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 SIKE1Q9BRV8 207 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 SLC25A23Q9BV35 468 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 MMP25Q9NPA2 562 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 ATAD3AQ9NVI7 634 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 TAS2R7Q9NYW3 318 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 PCDHGB7Q9Y5F8 929 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 PCDHGA9Q9Y5G4 932 aaKnown RBP11.07□□□□□ -0.64
SNCA-202ENST00000345009 USH1CQ9Y6N9 552 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 CROCCQ5TZA2 2017 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 MED13Q9UHV7 2174 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 C17orf105B2RV13 164 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 DIAPH2O60879 1101 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 VIMP08670 466 aaKnown RBP11.06□□□□□ -0.64
SNCA-202ENST00000345009 PRR35P0CG20 571 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 CPMP14384 443 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 SDC1P18827 310 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 MDH1P40925 334 aaKnown RBP11.06□□□□□ -0.64
SNCA-202ENST00000345009 CLCN2P51788 898 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 PGDP52209 483 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 SLC26A5P58743 744 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 ID2Q02363 134 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 CHAF1BQ13112 559 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 KCNAB2Q13303 367 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 FAM71E1Q6IPT2 247 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 FAM47EQ6ZV65 393 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 HPS6Q86YV9 775 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 SHISA5Q8N114 240 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 LRRC25Q8N386 305 aaPredicted RBP11.06□□□□□ -0.64
SNCA-202ENST00000345009 LIX1Q8N485 282 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 SLC5A8Q8N695 610 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 LSM14AQ8ND56 463 aaKnown RBP11.06□□□□□ -0.64
SNCA-202ENST00000345009 CEP70Q8NHQ1 597 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNCA-202ENST00000345009 ACTRT2Q8TDY3 377 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 PPCDCQ96CD2 204 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 VMP1Q96GC9 406 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 ZNF764Q96H86 408 aaPredicted RBP11.06□□□□□ -0.64
SNCA-202ENST00000345009 TSSK3Q96PN8 268 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 UBL7Q96S82 380 aaPredicted RBP11.06□□□□□ -0.64
SNCA-202ENST00000345009 REEP4Q9H6H4 257 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 KCNK13Q9HB14 408 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 SLCO1B3Q9NPD5 702 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 SLC35C2Q9NQQ7 365 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 ASIC5Q9NY37 505 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 CES1P1Q9UKY3 287 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 ZFYVE26Q68DK2 2539 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 ATMQ13315 3056 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 FAM208BQ5VWN6 2430 aa11.06□□□□□ -0.64
SNCA-202ENST00000345009 A8MUI8 341 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 SDHDO14521 159 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 POLR3GO15318 223 aaPredicted RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 AKAP10O43572 662 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 PRKRAO75569 313 aaKnown RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 CEACAM4O75871 244 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 ATP1B1P05026 303 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 JUNP05412 331 aaKnown RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 TROVE2P10155 538 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNCA-202ENST00000345009 NT5EP21589 574 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 EPHA3P29320 983 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 NTSP30990 170 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 FEN1P39748 380 aaKnown RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 EFNA3P52797 238 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 GUCY1A3Q02108 690 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 CRB2Q5IJ48 1285 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 VWA5B1Q5TIE3 1220 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 CPZQ66K79 652 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 OGFOD2Q6N063 350 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 LARP4Q71RC2 724 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNCA-202ENST00000345009 TICAM1Q8IUC6 712 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 GALNT12Q8IXK2 581 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 OR5L2Q8NGL0 311 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 OR1N1Q8NGS0 311 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 C9orf43Q8TAL5 461 aaPredicted RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 PTPMT1Q8WUK0 201 aaPredicted RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 TTC9Q92623 222 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 EXOSC8Q96B26 276 aaKnown RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 SENP5Q96HI0 755 aaPredicted RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 FBXL20Q96IG2 436 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 LMF1Q96S06 567 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 WDR77Q9BQA1 342 aaPredicted RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 C1orf50Q9BV19 199 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 TRIM55Q9BYV6 548 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 DEFB126Q9BYW3 111 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 OR8D2Q9GZM6 311 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 SH3BP4Q9P0V3 963 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 C5AR2Q9P296 337 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 ABI3Q9P2A4 366 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 HEY2Q9UBP5 337 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 BAIAP2L1Q9UHR4 511 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 PPIEQ9UNP9 301 aaKnown RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 ZNF451Q9Y4E5 1061 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 CLDN16Q9Y5I7 305 aa11.05□□□□□ -0.64
SNCA-202ENST00000345009 TLN1Q9Y490 2541 aaKnown RBP11.05□□□□□ -0.64
SNCA-202ENST00000345009 NUP210LQ5VU65 1888 aa11.04□□□□□ -0.64
SNCA-202ENST00000345009 GOLGA8QA0A0J9YX86 632 aa11.04□□□□□ -0.64
SNCA-202ENST00000345009 MYOCOSA0A1B0GUC4 107 aa11.04□□□□□ -0.64
SNCA-202ENST00000345009 GOLGA8OA6NCC3 632 aa11.04□□□□□ -0.64
SNCA-202ENST00000345009 WASHC1A8K0Z3 465 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms