RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 FAM122CQ6P4D5 195 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ANGPTL8Q6UXH0 198 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 DENND1CQ8IV53 801 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 VRK3Q8IV63 474 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 LYSMD1Q96S90 227 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 GHITMQ9H3K2 345 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 SLCO1C1Q9NYB5 712 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 GULP1Q9UBP9 304 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ADAM30Q9UKF2 790 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ACSL6Q9UKU0 697 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 NCKAP1Q9Y2A7 1128 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 FCF1Q9Y324 198 aaKnown RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 OR51B4Q9Y5P0 310 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 HELZP42694 1942 aaKnown RBP9.18□□□□□ -0.94
HOXA1-201ENST00000343060 FRMPD3Q5JV73 1810 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 A0A0A6YYJ9 748 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 E7EQ34 232 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 I3L521 148 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 SLC19A2O60779 497 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 SOCS5O75159 536 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 RPLP2P05387 115 aaKnown RBP9.18□□□□□ -0.94
HOXA1-201ENST00000343060 ATP5C1P36542 298 aaKnown RBP9.18□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF763Q0D2J5 394 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 RAB40BQ12829 278 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 ADAM15Q13444 863 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 GPR176Q14439 515 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 MPEG1Q2M385 716 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 MPPE1Q53F39 396 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 MZT2AQ6P582 158 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 GPAT4Q86UL3 456 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 ADGRG3Q86Y34 549 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF280BQ86YH2 543 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 GPR26Q8NDV2 337 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 GPR32P1Q8NGA4 272 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 OR4K1Q8NGD4 311 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 C1GALT1C1Q96EU7 318 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 TEFMQ96QE5 360 aaKnown RBP9.18□□□□□ -0.94
HOXA1-201ENST00000343060 ADAM2Q99965 735 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 MALT1Q9UDY8 824 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 MGAT4AQ9UM21 535 aa9.18□□□□□ -0.94
HOXA1-201ENST00000343060 EXOSC1Q9Y3B2 195 aaKnown RBP9.18□□□□□ -0.94
HOXA1-201ENST00000343060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 SMIM30A4D0T7 59 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 FURINP09958 794 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 OR56A5P0C7T3 313 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 ACP2P11117 423 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 BTCP35070 178 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CASP9P55211 416 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CAV3P56539 151 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 MADCAM1Q13477 382 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CDH18Q13634 790 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 DDX39BQ13838 428 aaKnown RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 SLC5A12Q1EHB4 618 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CTXN3Q4LDR2 81 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 MORN1Q5T089 497 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 DCST1Q5T197 706 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CD276Q5ZPR3 534 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 COMMD7Q86VX2 200 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 THOC6Q86W42 341 aaKnown RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 ADGRF3Q8IZF5 1079 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 SDR16C5Q8N3Y7 309 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 OR11H7Q8NGC8 314 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CHFRQ96EP1 664 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 PDXPQ96GD0 296 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 PKP4Q99569 1192 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 TM9SF2Q99805 663 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 ARHGAP9Q9BRR9 750 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 RNF32Q9H0A6 362 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 ATG10Q9H0Y0 220 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 POLR2J3Q9H1A7 115 aaKnown RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 TUBAL3A6NHL2 446 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 H3BN98 237 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 SLC9A3R1O14745 358 aaPredicted RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CASKO14936 926 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 HRO43593 1189 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 SH3BP5O60239 455 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 STC2O76061 302 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 TPPPO94811 219 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 H1F0P07305 194 aaKnown RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 RRASP10301 218 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 ANXA3P12429 323 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 STOMP27105 288 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CORO1AP31146 461 aaKnown RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 RPL3P39023 403 aaKnown RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CSNK1DP48730 415 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 DGKGP49619 791 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 PNLIPRP1P54315 467 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 DSTNP60981 165 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 GRK1Q15835 563 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 NDUFA9Q16795 377 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 HSD17B12Q53GQ0 312 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 ARHGAP15Q53QZ3 475 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 OR2G6Q5TZ20 316 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 REEP3Q6NUK4 255 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 TCTN3Q6NUS6 607 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 C16orf59Q7L2K0 433 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 MRGPREQ86SM8 312 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 LRRC56Q8IYG6 542 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms