RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TREX1Q9NSU2 369 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 EFCAB9A8MZ26 197 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 LMO7DNF2Z398 122 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 VILLO15195 856 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 PPP3R1P63098 170 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 KCNAB1Q14722 419 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 SFT2D3Q587I9 215 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 C6orf120Q7Z4R8 191 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 OR2I1PQ8NGU4 316 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 ASB11Q8WXH4 323 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 BMFQ96LC9 184 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 EHD1Q9H4M9 534 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 BRD7Q9NPI1 651 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 C5AR2Q9P296 337 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 BCKDHAP12694 445 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 SFTPDP35247 375 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 KRTCAP2Q8N6L1 136 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 EBF4Q9BQW3 602 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 MFRPQ9BY79 579 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 COMMD4Q9H0A8 199 aa12.18□□□□□ -0.46
LIN54-201ENST00000340417 SPTY2D1-AS1A0A0U1RR47 76 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 SLC22A2O15244 555 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 S100GP29377 79 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 DMTNQ08495 405 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 NPTX1Q15818 432 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 CLEC12AQ5QGZ9 265 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 CXXC5Q7LFL8 322 aaKnown RBP12.17□□□□□ -0.46
LIN54-201ENST00000340417 ZNF595Q8IYB9 648 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 PDPRQ8NCN5 879 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 OR7A2PQ8NGA2 310 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 RSC1A1Q92681 617 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 LRRC58Q96CX6 371 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 SMURF2Q9HAU4 748 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 ADAMTS6Q9UKP5 1117 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 UGT2B11O75310 529 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 KCNK5O95279 499 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 PEPDP12955 493 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 EEFSECP57772 596 aaKnown RBP12.17□□□□□ -0.46
LIN54-201ENST00000340417 SGCAQ16586 387 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 IZUMO1Q8IYV9 350 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 POLR2J3Q9H1A7 115 aaKnown RBP12.17□□□□□ -0.46
LIN54-201ENST00000340417 ATAD5Q96QE3 1844 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 PIAS2O75928 621 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 CTSLP07711 333 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 EIF3IQ13347 325 aaKnown RBP12.17□□□□□ -0.46
LIN54-201ENST00000340417 CYS1Q717R9 158 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 ISCA2Q86U28 154 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 LMNTD1Q8N9Z9 388 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 MTERF3Q96E29 417 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 OR52B2Q96RD2 323 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 STMN3Q9NZ72 180 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 COQ3Q9NZJ6 369 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 VLDLRP98155 873 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
LIN54-201ENST00000340417 OR9A2Q8NGT5 310 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 KHSRPQ92945 711 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■■□ 21.7
LIN54-201ENST00000340417 PTERQ96BW5 349 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 HDHD2Q9H0R4 259 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 BRF2Q9HAW0 419 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 PCTPQ9UKL6 214 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 STMND1H3BQB6 276 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 KLRC4-KLRK1H3BQV0 150 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 EIF1AYO14602 144 aaKnown RBP12.17□□□□□ -0.46
LIN54-201ENST00000340417 SCAMP2O15127 329 aaKnown RBP12.17□□□□□ -0.46
LIN54-201ENST00000340417 IFI30P13284 250 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 ANPEPP15144 967 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 COL9A1P20849 921 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 NEDD8Q15843 81 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 PAPD4Q6PIY7 484 aaKnown RBP12.17□□□□□ -0.46
LIN54-201ENST00000340417 TMEM184AQ6ZMB5 413 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 SLC34A3Q8N130 599 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 OR52P1PQ8NH57 321 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 PCDHGB7Q9Y5F8 929 aa12.17□□□□□ -0.46
LIN54-201ENST00000340417 PSMG1O95456 288 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 PTNP21246 168 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 RAB38P57729 211 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 PTGR1Q14914 329 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 ZNF423Q2M1K9 1284 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 TMEM71Q6P5X7 295 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 CHCHD4Q8N4Q1 142 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 CCL4L1Q8NHW4 92 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 RBM4BQ9BQ04 359 aaKnown RBP12.16□□□□□ -0.46
LIN54-201ENST00000340417 ORAI3Q9BRQ5 295 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 RBM4Q9BWF3 364 aaKnown RBP12.16□□□□□ -0.46
LIN54-201ENST00000340417 TMEM185BQ9H7F4 350 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 FSCN3Q9NQT6 498 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 EIF3KQ9UBQ5 218 aaKnown RBP12.16□□□□□ -0.46
LIN54-201ENST00000340417 RFPL1O75677 317 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 DGCR6Q14129 220 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 STK11Q15831 433 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 HMBOX1Q6NT76 420 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 HPS6Q86YV9 775 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 OR10H4Q8NGA5 316 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 TLCD1Q96CP7 247 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 ACTRT3Q9BYD9 372 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 SEMA4GQ9NTN9 838 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 MT-ND5P03915 603 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 LHCGRP22888 699 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 SEMA3BQ13214 749 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms