RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 RORCP51449 518 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 SNRPD1P62314 119 aaKnown RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 MAP4K2Q12851 820 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 SPOUT1Q5T280 376 aaKnown RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF783Q6ZMS7 281 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 TMEM25Q86YD3 366 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 DNAJC5GQ8N7S2 189 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 C2orf15Q8WU43 125 aaKnown RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PMEPA1Q969W9 287 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ECHDC3Q96DC8 303 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 TMEM19Q96HH6 336 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 SMAD5Q99717 465 aaKnown RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF717Q9BY31 904 aaPredicted RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 QRSL1Q9H0R6 528 aaKnown RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 IL21Q9HBE4 155 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 TAAR2Q9P1P5 351 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PLEKHB1Q9UF11 243 aaPredicted RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 CMAHPQ9Y471 501 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ABHD14A-ACY1A0A1B0GW23 586 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF670-ZNF695F2Z2N8 137 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 K7ESM1 405 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PPM1DO15297 605 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 SH3BP5O60239 455 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PSIP1O75475 530 aaKnown RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 TSPAN19P0C672 248 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 MPC1LP0DKB6 136 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 OR12D1P0DN82 309 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 NPPBP16860 134 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 NAGAP17050 411 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 DDOSTP39656 456 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 MAN2A2P49641 1150 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 XKP51811 444 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PCBP3P57721 371 aaKnown RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 RBBP4Q09028 425 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 GRIN2CQ14957 1233 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 TIMM50Q3ZCQ8 353 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 GPAT3Q53EU6 434 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PLEKHS1Q5SXH7 462 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 SAXO2Q658L1 398 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ACSM5Q6NUN0 579 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 MED27Q6P2C8 311 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 CCDC149Q6ZUS6 474 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PDZD3Q86UT5 571 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF557Q8N988 423 aaPredicted RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF689Q96CS4 500 aaPredicted RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 LYSMD1Q96S90 227 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 NELL2Q99435 816 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 YIPF4Q9BSR8 244 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 PLA2G12AQ9BZM1 189 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 KCNK12Q9HB15 430 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 IL20RAQ9UHF4 553 aa11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF106Q9H2Y7 1883 aaKnown RBP11.35□□□□□ -0.59
CCDC144CP-201ENST00000340196 A0A075B6Q4 140 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 PIPSLA2A3N6 862 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 NEDD8-MDP1E9PL57 170 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 DPM1O60762 260 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 PRKRAO75569 313 aaKnown RBP11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 CCNYL3P0C7X3 344 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 MYL9P24844 172 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 CSTF2P33240 577 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 DSTNP60981 165 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 RUNX1T1Q06455 604 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 CCDC85BQ15834 202 aaPredicted RBP11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 TMEM220Q6QAJ8 160 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 UBE2Q1Q7Z7E8 422 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 NOXA1Q86UR1 476 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 OR52P1PQ8NH57 321 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 KLHL6Q8WZ60 621 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 C1GALT1C1Q96EU7 318 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 TMEM80Q96HE8 168 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 SNX18Q96RF0 628 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 GDF15Q99988 308 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 UCK2Q9BZX2 261 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 MIEF1Q9NQG6 463 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 SHISA3A0PJX4 238 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 CCDC182A6NF36 153 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 MYL12BO14950 172 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 FRS3O43559 492 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 GPR37L1O60883 481 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 LEFTY1O75610 366 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 SLCO2B1O94956 709 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 TIMP1P01033 207 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 ARAFP10398 606 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 CTSAP10619 480 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 PSKH1P11801 424 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 CTRB1P17538 263 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 HTR2BP41595 481 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 PTPN5P54829 565 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 MLLT1Q03111 559 aaPredicted RBP11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 C19orf57Q0VDD7 668 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 EFR3AQ14156 821 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 SYPL1Q16563 259 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 GLYR1Q49A26 553 aaPredicted RBP11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 SPIN4Q56A73 249 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 CDKL4Q5MAI5 379 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 PXDC1Q5TGL8 231 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 CTRB2Q6GPI1 263 aa11.34□□□□□ -0.59
CCDC144CP-201ENST00000340196 TRIM40Q6P9F5 258 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms