RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NEURL2Q9BR09 285 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ACOT13Q9NPJ3 140 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 KLHL20Q9Y2M5 609 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ASB4Q9Y574 426 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 CCDC88CQ9P219 2028 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ANHXE9PGG2 379 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 FFAR1O14842 300 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 SULT1C4O75897 302 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 EML2O95834 649 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 HOXC4P09017 264 aaPredicted RBP16.46■□□□□ 0.23
DDX28-201ENST00000332395 OR12D1P0DN82 309 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 POU2F1P14859 743 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 NTSP30990 170 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 MVKQ03426 396 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 FOXD4Q12950 439 aaPredicted RBP16.46■□□□□ 0.23
DDX28-201ENST00000332395 HTR4Q13639 388 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 SPCS2Q15005 226 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 CTF1Q16619 201 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 TOR1AIP1Q5JTV8 583 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 SYT6Q5T7P8 510 aaPredicted RBP16.46■□□□□ 0.23
DDX28-201ENST00000332395 MRM1Q6IN84 353 aaKnown RBP16.46■□□□□ 0.23
DDX28-201ENST00000332395 ENPP7Q6UWV6 458 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 TAGAPQ8N103 731 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 TRUB1Q8WWH5 349 aaKnown RBP16.46■□□□□ 0.23
DDX28-201ENST00000332395 GTPBP3Q969Y2 492 aaKnown RBP16.46■□□□□ 0.23
DDX28-201ENST00000332395 BBS4Q96RK4 519 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 SIGLEC11Q96RL6 698 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 OR51I1Q9H343 314 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 SYNPO2LQ9H987 977 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 CD93Q9NPY3 652 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 ZCCHC3Q9NUD5 404 aaKnown RBP16.46■□□□□ 0.23
DDX28-201ENST00000332395 ZSCAN32Q9NX65 697 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 NCKAP1Q9Y2A7 1128 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 CA5BQ9Y2D0 317 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 ATG4BQ9Y4P1 393 aa16.46■□□□□ 0.23
DDX28-201ENST00000332395 A0A1W2PR48 441 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 TMEM247A6NEH6 219 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 ARRDC5A6NEK1 342 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 ISM1B1AKI9 464 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 H0Y8X5 98 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 AXIN1O15169 862 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 SLC28A2O43868 658 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 CBLP22681 906 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 ATP5A1P25705 553 aaKnown RBP16.45■□□□□ 0.22
DDX28-201ENST00000332395 AK4P27144 223 aaPredicted RBP16.45■□□□□ 0.22
DDX28-201ENST00000332395 IDH2P48735 452 aaKnown RBP16.45■□□□□ 0.22
DDX28-201ENST00000332395 ZNF425Q6IV72 752 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 USP30Q70CQ3 517 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 AMIGO1Q86WK6 493 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 AQP11Q8NBQ7 271 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 OR4E2Q8NGC2 313 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 OR5D16Q8NGK9 328 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 RHOXF1Q8NHV9 184 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 LCN9Q8WX39 176 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 ABHD8Q96I13 439 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 TREX2Q9BQ50 279 aaPredicted RBP16.45■□□□□ 0.22
DDX28-201ENST00000332395 P2RX2Q9UBL9 471 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 PRAMEF27A3QJZ7 478 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 ERAL1O75616 437 aaKnown RBP16.45■□□□□ 0.22
DDX28-201ENST00000332395 GABARAPO95166 117 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 CHRM5P08912 532 aaPredicted RBP16.45■□□□□ 0.22
DDX28-201ENST00000332395 CERS1P27544 350 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 PSMB9P28065 219 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 ATP1A4Q13733 1029 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 NFATC4Q14934 902 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 SYPL1Q16563 259 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 COLEC12Q5KU26 742 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 RD3Q7Z3Z2 195 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 CCDC103Q8IW40 242 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 PARP8Q8N3A8 854 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 MFSD9Q8NBP5 474 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 UTP15Q8TED0 518 aaKnown RBP16.45■□□□□ 0.22
DDX28-201ENST00000332395 COL21A1Q96P44 957 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 ZNF607Q96SK3 696 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 OR6C2Q9NZP2 312 aa16.45■□□□□ 0.22
DDX28-201ENST00000332395 PGRMC2O15173 223 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 GUCY1B2O75343 617 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 CDH3P22223 829 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 SLC19A1P41440 591 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 KCNJ5P48544 419 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ARFIP1P53367 373 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 DGCR6Q14129 220 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 TPRG1LQ5T0D9 272 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ZBTB46Q86UZ6 589 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 DEPDC4Q8N2C3 294 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 XAGE5Q8WWM1 108 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 RASSF5Q8WWW0 418 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 YIPF6Q96EC8 236 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 MRGPRX1Q96LB2 322 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ZNF354BQ96LW1 612 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 NMNAT1Q9HAN9 279 aaPredicted RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 PLCXD1Q9NUJ7 323 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 TRPC4Q9UBN4 977 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 SEC14L3Q9UDX4 400 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ENOPH1Q9UHY7 261 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 FBXW2Q9UKT8 454 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 SNX7Q9UNH6 387 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 B3GNT3Q9Y2A9 372 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 MDC1Q14676 2089 aaKnown RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 TRBV4-1A0A0J9YWV2 114 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms