RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 TPSD1Q9BZJ3 242 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 KATNBL1Q9H079 304 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 NMNAT1Q9HAN9 279 aaPredicted RBP15.71■□□□□ 0.11
CLIP4-201ENST00000320081 SESN1Q9Y6P5 492 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 UQCRC2P22695 453 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 EDNRAP25101 427 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 BMP8BP34820 402 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 PUM1Q14671 1186 aaKnown RBP eCLIP15.71■□□□□ 0.11
CLIP4-201ENST00000320081 ZNF783Q6ZMS7 281 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 BMP8AQ7Z5Y6 402 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 PROKR2Q8NFJ6 384 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 UHRF1Q96T88 793 aaPredicted RBP15.71■□□□□ 0.11
CLIP4-201ENST00000320081 PVRP15151 417 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 AOAHP28039 575 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 NUP62P37198 522 aaPredicted RBP15.71■□□□□ 0.11
CLIP4-201ENST00000320081 CSNK1DP48730 415 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 LIN54Q6MZP7 749 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 CEP68Q76N32 757 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 BCDIN3DQ7Z5W3 292 aaKnown RBP15.71■□□□□ 0.11
CLIP4-201ENST00000320081 IGFN1Q86VF2 1251 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 MSLNLQ96KJ4 702 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 EIF3KQ9UBQ5 218 aaKnown RBP15.71■□□□□ 0.11
CLIP4-201ENST00000320081 A0A1B0GW55 424 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 PLD2O14939 933 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 SDC3O75056 442 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 PRLP01236 227 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 DUX4L2P0CJ85 424 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 DUX4L3P0CJ86 424 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 DUX4L4P0CJ87 422 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 DUX4L5P0CJ88 424 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 DUX4L6P0CJ89 424 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 DUX4L7P0CJ90 424 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 CERS1P27544 350 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 ERVFC1P60507 584 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 NCCRP1Q6ZVX7 275 aaPredicted RBP15.71■□□□□ 0.1
CLIP4-201ENST00000320081 MOSPD2Q8NHP6 518 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 C9orf43Q8TAL5 461 aaPredicted RBP15.71■□□□□ 0.1
CLIP4-201ENST00000320081 MMABQ96EY8 250 aaPredicted RBP15.71■□□□□ 0.1
CLIP4-201ENST00000320081 TAS2R7Q9NYW3 318 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 HCN3Q9P1Z3 774 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 DUX4Q9UBX2 424 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 CYP8B1Q9UNU6 501 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 STRCP1A6NGW2 1772 aa15.71■□□□□ 0.1
CLIP4-201ENST00000320081 KRT33AO76009 404 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 GIMD1P0DJR0 217 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 CTSAP10619 480 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 IL12BP29460 328 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 TUBA3CQ13748 450 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 NRMQ8IXM6 262 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 GAB3Q8WWW8 586 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 MND1Q9BWT6 205 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 B3GNT4Q9C0J1 378 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 SRA1Q9HD15 236 aaKnown RBP15.7■□□□□ 0.1
CLIP4-201ENST00000320081 MKKSQ9NPJ1 570 aaPredicted RBP15.7■□□□□ 0.1
CLIP4-201ENST00000320081 COMMD9Q9P000 198 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 KCMF1Q9P0J7 381 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 PHF11Q9UIL8 331 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 ORC5O43913 435 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 GKN3PP0CG01 181 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 LHCGRP22888 699 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 IGFALSP35858 605 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 ZNF234Q14588 700 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 SYPL1Q16563 259 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 ASB11Q8WXH4 323 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 ECHDC3Q96DC8 303 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 CAMK1GQ96NX5 476 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 TBL1XR1Q9BZK7 514 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 TM7SF3Q9NS93 570 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 FKBP7Q9Y680 259 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 HMGN2P05204 90 aaKnown RBP15.7■□□□□ 0.1
CLIP4-201ENST00000320081 TIMP2P16035 220 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 MC3RP41968 323 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 RPL6Q02878 288 aaKnown RBP15.7■□□□□ 0.1
CLIP4-201ENST00000320081 NDUFA9Q16795 377 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 OR8H3Q8N146 312 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 OR4K14Q8NGD5 310 aa15.7■□□□□ 0.1
CLIP4-201ENST00000320081 RIF1Q5UIP0 2472 aaKnown RBP15.7■□□□□ 0.1
CLIP4-201ENST00000320081 NBASA2RRP1 2371 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 HMGN1P05114 100 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 GYPBP06028 91 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 SMAD2Q15796 467 aaKnown RBP15.69■□□□□ 0.1
CLIP4-201ENST00000320081 TBRG1Q3YBR2 411 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 TSPYL5Q86VY4 417 aaPredicted RBP15.69■□□□□ 0.1
CLIP4-201ENST00000320081 TTLQ8NG68 377 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 OR2A12Q8NGT7 310 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 OR5P2Q8WZ92 322 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 DSN1Q9H410 356 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 IKZF5Q9H5V7 419 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 ZNF224Q9NZL3 707 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 PCDHA9Q9Y5H5 950 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 CTDSP2O14595 271 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 RAD1O60671 282 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 TRIM3O75382 744 aaPredicted RBP15.69■□□□□ 0.1
CLIP4-201ENST00000320081 C4BPBP20851 252 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 CRHBPP24387 322 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 GSTM2P28161 218 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 PIK3CBP42338 1070 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 CAV3P56539 151 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 SNRPD2P62316 118 aaKnown RBP15.69■□□□□ 0.1
CLIP4-201ENST00000320081 FLYWCH1Q4VC44 716 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms