RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TFGQ92734 400 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 F2RL3Q96RI0 385 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 ZCCHC2Q9C0B9 1178 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 RLIMQ9NVW2 624 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 CKAP5Q14008 2032 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 J3KTA2 159 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 ITGB7P26010 798 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 TIE1P35590 1138 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 ZNF763Q0D2J5 394 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 MED22Q15528 200 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 SSX1Q16384 188 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 UAP1L1Q3KQV9 507 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 C10orf62Q5T681 223 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 RNF165Q6ZSG1 346 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 ERN2Q76MJ5 926 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 GLCCI1Q86VQ1 547 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 TRMT61AQ96FX7 289 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 DMRT3Q9NQL9 472 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 PLCXD1Q9NUJ7 323 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 RABL2AQ9UBK7 228 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 RPS6KA6Q9UK32 745 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 RAB23Q9ULC3 237 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 SMLR1H3BR10 107 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 PPM1DO15297 605 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 MID1O15344 667 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 UGDHO60701 494 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 LILRB5O75023 590 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 UQCRC1P31930 480 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 GPM6BQ13491 265 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 SLC5A12Q1EHB4 618 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 SPIN4Q56A73 249 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 TNFAIP8L2Q6P589 184 aaPredicted RBP14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 FAM124AQ86V42 546 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 YIPF7Q8N8F6 280 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 SETD6Q8TBK2 473 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 COL21A1Q96P44 957 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 ZDHHC5Q9C0B5 715 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 C11orf54Q9H0W9 315 aaPredicted RBP14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 SLC6A17Q9H1V8 727 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 ATP13A2Q9NQ11 1180 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 GPATCH2Q9NW75 528 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 SERGEFQ9UGK8 458 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 KLK4Q9Y5K2 254 aa14.77□□□□□ -0.04
SHROOM1-201ENST00000319854 PRAMEF33A0A0G2JMD5 474 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 EDDM13A0A1B0GTR0 161 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 TSPAN11A1L157 253 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 B4DXG7 233 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 POLR1CO15160 346 aaPredicted RBP14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 HNRNPA1P09651 372 aaKnown RBP eCLIP14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 GGT2P36268 569 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 ASMTP46597 345 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 CLCNKAP51800 687 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 FAPQ12884 760 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 PRAMEF14Q5SWL7 426 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 PRAMEF13Q5VWM6 474 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 TMIGD1Q6UXZ0 262 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 AMZ2Q86W34 360 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 ETFBKMTQ8IXQ9 262 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 LRIG1Q96JA1 1093 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 SRRQ9GZT4 340 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 KCNN3Q9UGI6 736 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 MTCL1Q9Y4B5 1905 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 NFATC1O95644 943 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 ACP5P13686 325 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 CDH12P55289 794 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 MPEG1Q2M385 716 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 NXPE4Q6UWF7 544 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 FLCNQ8NFG4 579 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 DNAJB8Q8NHS0 232 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 C16orf78Q8WTQ4 265 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 DEDD2Q8WXF8 326 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 FEVQ99581 238 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 MGLLQ99685 303 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 REEP4Q9H6H4 257 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 KCNK6Q9Y257 313 aa14.77□□□□□ -0.05
SHROOM1-201ENST00000319854 RFXAPO00287 272 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 CCNYL3P0C7X3 344 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 HSPB3Q12988 150 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 FAAH2Q6GMR7 532 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 SDE2Q6IQ49 451 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 FBXO46Q6PJ61 603 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 OLIG3Q7RTU3 272 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 GRAMD2AQ8IUY3 354 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 C11orf65Q8NCR3 313 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 ZFAND1Q8TCF1 268 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 UCN3Q969E3 161 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 ASB16Q96NS5 453 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 KXD1Q9BQD3 176 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 GON7Q9BXV9 100 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 UCK2Q9BZX2 261 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 EXOSC4Q9NPD3 245 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 FZD3Q9NPG1 666 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 MBNL1Q9NR56 388 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 IMP3Q9NV31 184 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 CFL2Q9Y281 166 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 AP3M1Q9Y2T2 418 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 PLEKHM1Q9Y4G2 1056 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 SNX11Q9Y5W9 270 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 HELZP42694 1942 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 LRRK1Q38SD2 2015 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms