RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 GAL3ST1Q99999 423 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 WSB2Q9NYS7 404 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-201ENST00000318607 MYO15AQ9UKN7 3530 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 SIP14410 1827 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 GAPDHSO14556 408 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-201ENST00000318607 POLR2EP19388 210 aaKnown RBP13.51□□□□□ -0.25
PABPC1-201ENST00000318607 IDSP22304 550 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 FUT10Q6P4F1 479 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 C2orf69Q8N8R5 385 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 FAM120CQ9NX05 1096 aaKnown RBP13.51□□□□□ -0.25
PABPC1-201ENST00000318607 SH2B3Q9UQQ2 575 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 GSTK1Q9Y2Q3 226 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 PCDHB7Q9Y5E2 793 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 KCNE2Q9Y6J6 123 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 CSNK1G3Q9Y6M4 447 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 MAGEB4O15481 346 aaPredicted RBP13.5□□□□□ -0.25
PABPC1-201ENST00000318607 UGT2B17O75795 530 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 AKR1A1P14550 325 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 CRYBB2P43320 205 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 AP2S1P53680 142 aaPredicted RBP13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SLC3A1Q07837 685 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 BTN1A1Q13410 526 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 TOR2AQ5JU69 321 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 ARL9Q6T311 187 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SYNPOQ8N3V7 929 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 TMEM145Q8NBT3 493 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 CYB5D2Q8WUJ1 264 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 RIOK2Q9BVS4 552 aaKnown RBP13.5□□□□□ -0.25
PABPC1-201ENST00000318607 B3GAT2Q9NPZ5 323 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SEC14L4Q9UDX3 406 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SLC13A4Q9UKG4 626 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 ERVW-1Q9UQF0 538 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 PCDHGB2Q9Y5G2 931 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 FEZF1A0PJY2 475 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 ANHXE9PGG2 379 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 PRMT3O60678 531 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SCN2BO60939 215 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 EPHX1P07099 455 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 OR12D1P0DN82 309 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 ARSBP15848 533 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 LHCGRP22888 699 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SLC9A3P48764 834 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SLC11A1P49279 550 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 PFN3P60673 137 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 MAB21L1Q13394 359 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SYPL1Q16563 259 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 YIF1BQ5BJH7 314 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 FBLIM1Q8WUP2 373 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 GEMIN6Q8WXD5 167 aaKnown RBP13.5□□□□□ -0.25
PABPC1-201ENST00000318607 TMEM19Q96HH6 336 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 AP3M1Q9Y2T2 418 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 KLK4Q9Y5K2 254 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 SCN2AQ99250 2005 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 ATG2BQ96BY7 2078 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 MAP1BP46821 2468 aaKnown RBP13.5□□□□□ -0.25
PABPC1-201ENST00000318607 RTTNQ86VV8 2226 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
PABPC1-201ENST00000318607 ZNF840PA6NDX5 716 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 PPM1DO15297 605 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 F11P03951 625 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 ENPP1P22413 925 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 DSTNP60981 165 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 PTSQ03393 145 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.49□□□□□ -0.255e-9■□□□□ 10.3
PABPC1-201ENST00000318607 SFRP4Q6FHJ7 346 aaPredicted RBP13.49□□□□□ -0.25
PABPC1-201ENST00000318607 DBF4BQ8NFT6 615 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 OR51G2Q8NGK0 314 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 HCAR2Q8TDS4 363 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 UPF1Q92900 1129 aaKnown RBP eCLIP13.49□□□□□ -0.25
PABPC1-201ENST00000318607 TESCQ96BS2 214 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 PITX2Q99697 317 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 HTATIP2Q9BUP3 242 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 KATNB1Q9BVA0 655 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 C2orf49Q9BVC5 232 aaPredicted RBP13.49□□□□□ -0.25
PABPC1-201ENST00000318607 MND1Q9BWT6 205 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 SLC6A16Q9GZN6 736 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 OR51V1Q9H2C8 321 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 MED20Q9H944 212 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 RDH8Q9NYR8 311 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 ANGPT4Q9Y264 503 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 NTNG1Q9Y2I2 539 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 GRIP1Q9Y3R0 1128 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 OTOFQ9HC10 1997 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 GRXCR2A6NFK2 248 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 H1F0P07305 194 aaKnown RBP13.49□□□□□ -0.25
PABPC1-201ENST00000318607 JUPP14923 745 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 ACVR1BP36896 505 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 CCR6P51684 374 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 FABP5Q01469 135 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 FAM110CQ1W6H9 321 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 TOR1AIP1Q5JTV8 583 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 HSDL2Q6YN16 418 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 SLC7A13Q8TCU3 470 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 TADA1Q96BN2 335 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 SLA2Q9H6Q3 261 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 ELAC1Q9H777 363 aaKnown RBP13.49□□□□□ -0.25
PABPC1-201ENST00000318607 ANKHQ9HCJ1 492 aa13.49□□□□□ -0.25
PABPC1-201ENST00000318607 POLHQ9Y253 713 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms