RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 DNAJB6O75190 326 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 DNAJB5O75953 348 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 FESP07332 822 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 FUT4P22083 530 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 NUDT1P36639 197 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 DEFB134Q4QY38 66 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 ZNF773Q6PK81 442 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 TMEM107Q6UX40 140 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 PARGQ86W56 976 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 FAM46DQ8NEK8 389 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 BAHD1Q8TBE0 780 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-201ENST00000315286 APOBEC4Q8WW27 367 aaKnown RBP17.32■□□□□ 0.36
CCDC43-201ENST00000315286 KLHL6Q8WZ60 621 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 FEVQ99581 238 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 PIP5K1AQ99755 562 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 ZFYVE21Q9BQ24 234 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 TREX2Q9BQ50 279 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-201ENST00000315286 YIPF4Q9BSR8 244 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 KCMF1Q9P0J7 381 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 P2RX2Q9UBL9 471 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 ENPP4Q9Y6X5 453 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 H0YGG7 62 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 KIF1CO43896 1103 aaKnown RBP17.32■□□□□ 0.36
CCDC43-201ENST00000315286 NR2F6P10588 404 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 JUNDP17535 347 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 MPIP34949 423 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 ARF3P61204 181 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-201ENST00000315286 PPP1CAP62136 330 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 ESRRGP62508 458 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 IL5RAQ01344 420 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 CDK5R2Q13319 367 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 PMS2P3Q13401 168 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 KEAP1Q14145 624 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 SUZ12Q15022 739 aaKnown RBP17.32■□□□□ 0.36
CCDC43-201ENST00000315286 CEBPEQ15744 281 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 EXOC3L2Q2M3D2 409 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 ZNF438Q7Z4V0 828 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 GPR141Q7Z602 305 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 SFXN5Q8TD22 340 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 FBLIM1Q8WUP2 373 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 POLR1BQ9H9Y6 1135 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 ACER3Q9NUN7 267 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 GIMAP4Q9NUV9 329 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 RLIMQ9NVW2 624 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 FAM32AQ9Y421 112 aaKnown RBP17.32■□□□□ 0.36
CCDC43-201ENST00000315286 KLK4Q9Y5K2 254 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 GMPPBQ9Y5P6 360 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 ZNF780BQ9Y6R6 833 aa17.32■□□□□ 0.36
CCDC43-201ENST00000315286 KRBA1A5PL33 1030 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 PDE9AO76083 593 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 IFNW1P05000 195 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 EIF2S1P05198 315 aaKnown RBP17.31■□□□□ 0.36
CCDC43-201ENST00000315286 HMGN2P05204 90 aaKnown RBP17.31■□□□□ 0.36
CCDC43-201ENST00000315286 BLKP51451 505 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 HHEXQ03014 270 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 KCNC4Q03721 635 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 RUNX2Q13950 521 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 LASP1Q14847 261 aaKnown RBP17.31■□□□□ 0.36
CCDC43-201ENST00000315286 ZBED5Q49AG3 693 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 OLIG3Q7RTU3 272 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 SLC5A8Q8N695 610 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 CAMKVQ8NCB2 501 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 OR10G2Q8NGC3 310 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 OR9A2Q8NGT5 310 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 CNIH3Q8TBE1 160 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 ZDHHC1Q8WTX9 485 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 THAP11Q96EK4 314 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 C16orf58Q96GQ5 468 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 C10orf90Q96M02 699 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 COL21A1Q96P44 957 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 SERINC2Q96SA4 455 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 LRRC61Q9BV99 259 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 FOXQ1Q9C009 403 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 ANKRA2Q9H9E1 313 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 PAPOLBQ9NRJ5 636 aaKnown RBP17.31■□□□□ 0.36
CCDC43-201ENST00000315286 TMEM74BQ9NUR3 256 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 AASSQ9UDR5 926 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 PSME2Q9UL46 239 aa17.31■□□□□ 0.36
CCDC43-201ENST00000315286 NDRG4Q9ULP0 352 aaKnown RBP17.31■□□□□ 0.36
CCDC43-201ENST00000315286 MRPS2Q9Y399 296 aaKnown RBP17.31■□□□□ 0.36
CCDC43-201ENST00000315286 TMEM247A6NEH6 219 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 WNT1P04628 370 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 NR2F1P10589 423 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 TYRP1P17643 537 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 RHCEP18577 417 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 NPRL3Q12980 569 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 GANABQ14697 944 aaKnown RBP17.3■□□□□ 0.36
CCDC43-201ENST00000315286 MICAQ29983 383 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 BHLHB9Q6PI77 547 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 ZNF605Q86T29 641 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 SETD9Q8NE22 299 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 HLA-CQ95604 372 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 ELP4Q96EB1 424 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 ROGDIQ9GZN7 287 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 RHCGQ9UBD6 479 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 USP34Q70CQ2 3546 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 A0A0J9YY10 115 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 URADA6NGE7 173 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 FAM170BA6NMN3 283 aa17.3■□□□□ 0.36
CCDC43-201ENST00000315286 PCDH17O14917 1159 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms