RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CLDN25C9JDP6 229 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 H3BSA7 217 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 CLIC1O00299 241 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 RAB3DO95716 219 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 TSPAN12O95859 305 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 LINC00271P0C7V0 271 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 IL1RNP18510 177 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 TNNI3P19429 210 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 FCARP24071 287 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PPP1R3AQ16821 1122 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 KHDC1Q4VXA5 237 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PRAMEF8Q5VWM4 474 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PRAMEF7Q5VXH5 474 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 LETMD1Q6P1Q0 360 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 SCIMPQ6UWF3 145 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 DCDC5Q6ZRR9 648 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 OR2L5Q8NG80 312 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 OR8K5Q8NH50 307 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 HUS1BQ8NHY5 278 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ZDHHC1Q8WTX9 485 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 CA5BP1Q8WTZ4 195 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 GEMIN6Q8WXD5 167 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 S100ZQ8WXG8 99 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 THRSPQ92748 146 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 TANKQ92844 425 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 MSLNLQ96KJ4 702 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 LGR4Q9BXB1 951 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 METTL8Q9H825 291 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 LTB4R2Q9NPC1 389 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PNPLA3Q9NST1 481 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 SPATA6Q9NWH7 488 aaPredicted RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 C19orf25Q9UFG5 118 aaPredicted RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 GTF2A1LQ9UNN4 478 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 SRPK3Q9UPE1 567 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 MAN2B2Q9Y2E5 1009 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 MYO1GB0I1T2 1018 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ST8SIA5O15466 376 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 AQP9O43315 295 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 GPR37L1O60883 481 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PLATP00750 562 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 YES1P07947 543 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ANXA8P13928 327 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 HPGDP15428 266 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 XRCC1P18887 633 aaPredicted RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 EPORP19235 508 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 CCNA2P20248 432 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 IMPA1P29218 277 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 UQCRC1P31930 480 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 RPS9P46781 194 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 TPMTP51580 245 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ACY1Q03154 408 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 CAMK1Q14012 370 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 SERTAD2Q14140 314 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 GRM7Q14831 915 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 NEDD8Q15843 81 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 HSD17B12Q53GQ0 312 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 C3orf33Q6P1S2 294 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 C12orf40Q86WS4 652 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PHTF2Q8N3S3 785 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 SFRP1Q8N474 314 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 TP53I13Q8NBR0 393 aaPredicted RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 OR52E4Q8NGH9 312 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ZFYVE21Q9BQ24 234 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 POLR2J2Q9GZM3 115 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 POLR2J3Q9H1A7 115 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 OR52A5Q9H2C5 316 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PDE7BQ9NP56 450 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 TMEM181Q9P2C4 612 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PRODH2Q9UF12 536 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ZNF175Q9Y473 711 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 H3BNX3 289 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 OR7A17O14581 309 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 AP3D1O14617 1153 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PCDH17O14917 1159 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ZNF821O75541 412 aaPredicted RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 IFNW1P05000 195 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 FCER2P06734 321 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 C4BPBP20851 252 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ATP6V1B2P21281 511 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 GSK3BP49841 420 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 SEPHS1P49903 392 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 UFM1P61960 85 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PIGGQ5H8A4 983 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ZNF362Q5T0B9 420 aaPredicted RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 LYSMD4Q5XG99 296 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ZCCHC12Q6PEW1 402 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 RHOUQ7L0Q8 258 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 LMX1AQ8TE12 382 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 FGF14Q92915 247 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 RFKQ969G6 155 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 CHFRQ96EP1 664 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 TCTN2Q96GX1 697 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 HS6ST2Q96MM7 605 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 NSUN5Q96P11 429 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 MTERF1Q99551 399 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 BARD1Q99728 777 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 GTPBP2Q9BX10 602 aaKnown RBP5.72□□□□□ -1.49
SEC22A-201ENST00000309934 PIGUQ9H490 435 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 ADAMTS6Q9UKP5 1117 aa5.72□□□□□ -1.49
SEC22A-201ENST00000309934 CA14Q9ULX7 337 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms