RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ERVW-1Q9UQF0 538 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 DERAQ9Y315 318 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 OIP5O43482 229 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 PRKCAP17252 672 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 CDKN2CP42773 168 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 USP53Q70EK8 1073 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 OR10T2Q8NGX3 314 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 SMOXQ9NWM0 555 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 GNG13Q9P2W3 67 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 ICKQ9UPZ9 632 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 LRRC42Q9Y546 428 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 H7C417 338 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 RHOP08100 348 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 MAOBP27338 520 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 TP53I3Q53FA7 332 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 AGTRAPQ6RW13 159 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 C12orf76Q8N812 135 aaPredicted RBP12.1□□□□□ -0.47
USP38-201ENST00000307017 METTL2AQ96IZ6 378 aaKnown RBP12.1□□□□□ -0.47
USP38-201ENST00000307017 TSPAN6O43657 245 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 INHAP05111 366 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 ADORA3P0DMS8 318 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 MAP2K3P46734 347 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 C9orf135Q5VTT2 229 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 OR5M10Q6IEU7 315 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 GPRIN1Q7Z2K8 1008 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 LRRTM4Q86VH4 590 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 FTMTQ8N4E7 242 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 DNAJB8Q8NHS0 232 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 NETO1Q8TDF5 533 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 HPGDSO60760 199 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 CLEC3AO75596 197 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 RBMXP38159 391 aaKnown RBP12.1□□□□□ -0.47
USP38-201ENST00000307017 OPRL1P41146 370 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 NRIP1P48552 1158 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 P2RY14Q15391 338 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 GTDC1Q4AE62 458 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 RAET1LQ5VY80 246 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 ARL14Q8N4G2 192 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 OR5D16Q8NGK9 328 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 ST7LQ8TDW4 575 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 LRR1Q96L50 414 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 MARCH4Q9P2E8 410 aaPredicted RBP12.1□□□□□ -0.47
USP38-201ENST00000307017 NPIPA2E9PIF3 369 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 NPIPA3F8WFD2 350 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 RGS9O75916 674 aaPredicted RBP12.1□□□□□ -0.47
USP38-201ENST00000307017 HNF1BP35680 557 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 ABHD18Q0P651 414 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 TMIGD1Q6UXZ0 262 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 ZFP82Q8N141 532 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 CELF5Q8N6W0 485 aaKnown RBP12.1□□□□□ -0.47
USP38-201ENST00000307017 OR52B6Q8NGF0 335 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 PITX2Q99697 317 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 PAAF1Q9BRP4 392 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 A0A1W2PP18 115 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 PRORSD1PA6NEY8 169 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 SLC16A8O95907 504 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 CD9P21926 228 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 NTRK2Q16620 822 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 DECR1Q16698 335 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 DUS1LQ6P1R4 473 aaKnown RBP12.1□□□□□ -0.47
USP38-201ENST00000307017 ZNF836Q6ZNA1 936 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 SLC44A3Q8N4M1 653 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 GTF2H4Q92759 462 aa12.1□□□□□ -0.47
USP38-201ENST00000307017 UNC119BA6NIH7 251 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 IRAK2O43187 625 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 LILRB3O75022 631 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 RAD51DO75771 328 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 GABRR1P24046 479 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 S100PP25815 95 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 GLP1RP43220 463 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ALDH3B1P43353 468 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ASTE1Q2TB18 679 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 KIAA0930Q6ICG6 404 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 B3GLCTQ6Y288 498 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 CD163Q86VB7 1156 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 PROKR1Q8TCW9 393 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ZNF442Q9H7R0 627 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 DNAJB4Q9UDY4 337 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 C1orf196B1AJZ1 125 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ANHXE9PGG2 379 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 RBBP9O75884 186 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 SGSHP51688 502 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 GAB1Q13480 694 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 GLB1L3Q8NCI6 653 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 PEX11GQ96HA9 241 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 IRS2Q9Y4H2 1338 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ZNF821O75541 412 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 RCBTB2O95199 551 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 TSPAN15O95858 294 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 LAG3P18627 525 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 RAB3BP20337 219 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ARRB1P49407 418 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 SLC10A2Q12908 348 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 HNRNPDQ14103 355 aaKnown RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 ZNF829Q3KNS6 432 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 DEFB134Q4QY38 66 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 HACD2Q6Y1H2 254 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 GPR155Q7Z3F1 870 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 LOC102723532A0A0G2JNH3 316 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms