RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TICAM1Q8IUC6 712 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 DNAJC22Q8N4W6 341 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CCDC71LQ8N9Z2 235 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CDC6Q99741 560 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 FAM83CQ9BQN1 747 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 RAB9BQ9NP90 201 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 BLOC1S5-TXNDC5H3BN57 136 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 PITPNBP48739 271 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF84P51523 738 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 MLLT1Q03111 559 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 SF3A2Q15428 464 aaKnown RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 GPRC6AQ5T6X5 926 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ARL14EPQ8N8R7 260 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 OR5T2Q8NGG2 359 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 OR8S1Q8NH09 359 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 SETD7Q8WTS6 366 aaKnown RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF486Q96H40 463 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CCDC120Q96HB5 630 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 MCHR1Q99705 422 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 HOXD1Q9GZZ0 328 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 OR51E2Q9H255 320 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 MCCC2Q9HCC0 563 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CENPMQ9NSP4 180 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ERVK-18Q9QC07 812 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 RREB1Q92766 1687 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 A0A1B0GVT2 93 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 H3BMQ9 156 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ETFAP13804 333 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 HMGN3Q15651 99 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 PGAP1Q75T13 922 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 TMEM173Q86WV6 379 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 OR51G2Q8NGK0 314 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 METTL2AQ96IZ6 378 aaKnown RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 COG8Q96MW5 612 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 TXLNGYQ9BZA5 131 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 SLC2A6Q9UGQ3 507 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 TRBV2A0A0J9YWF9 115 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 FUOMA2VDF0 154 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 C8AP07357 584 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 NDUFV2P19404 249 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CD6P30203 668 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CLDN8P56748 225 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 SLC18B1Q6NT16 456 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ANKRD54Q6NXT1 300 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 NOXA1Q86UR1 476 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 TREML1Q86YW5 311 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ACBD7Q8N6N7 88 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 RAB7BQ96AH8 199 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 PEBP4Q96S96 227 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 DPEP2Q9H4A9 486 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 KIAA1217Q5T5P2 1943 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CLDN7O95471 211 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CLCNKAP51800 687 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 MEF2DQ14814 521 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 PPP1R3AQ16821 1122 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 UGT8Q16880 541 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 UBE2NLQ5JXB2 153 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 RGMBQ6NW40 437 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 POC1BQ8TC44 478 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 KLHL15Q96M94 604 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 YIPF4Q9BSR8 244 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 NT5DC2Q9H857 520 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 EPHA6Q9UF33 1036 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 TEX51A0A1B0GUA7 166 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 TSTD3H0UI37 97 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 MT-CO2P00403 227 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CSF2P04141 144 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 MTNR1AP48039 350 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ACTR1AP61163 376 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 UGT3A2Q3SY77 523 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 MRPL41Q8IXM3 137 aaKnown RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 LRRC25Q8N386 305 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 SMARCD2Q92925 531 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 NPLQ9BXD5 320 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 POLE4Q9NR33 117 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CICQ96RK0 1608 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 RFPL3O75679 317 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 SNAPINO95295 136 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CH25HO95992 272 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 APOC3P02656 99 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 RAB5CP51148 216 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CXCR4P61073 352 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 GBX1Q14549 363 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 TIGD5Q53EQ6 642 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 IFNLR1Q8IU57 520 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 IGDCC3Q8IVU1 814 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF436Q9C0F3 470 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 LHPPQ9H008 270 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 LIN28AQ9H9Z2 209 aaKnown RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CARS2Q9HA77 564 aaKnown RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ARAP2Q8WZ64 1704 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 C1orf226A1L170 272 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SFTPBP07988 381 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 UBBP0CG47 229 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 UBCP0CG48 685 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TM4SF1P30408 202 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 RPS27AP62979 156 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 UBA52P62987 128 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ICKQ9UPZ9 632 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CACNG2Q9Y698 323 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms