RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 DNASE1P24855 282 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 STOMP27105 288 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 SLC6A1P30531 599 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 VIPR1P32241 457 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 BTCP35070 178 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 PCGF2P35227 344 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 XKP51811 444 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 ERVK-21P61565 698 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 PPP3R1P63098 170 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 ZNF273Q14593 569 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 HEPACAMQ14CZ8 416 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 NCF4Q15080 339 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 ANGPT1Q15389 498 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 CLLU1Q5K131 121 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 IDNKQ5T6J7 187 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 FRG2Q64ET8 278 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 FAM92BQ6ZTR7 304 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 ATAD1Q8NBU5 361 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 HJURPQ8NCD3 748 aaPredicted RBP12.81□□□□□ -0.36
SKA3-201ENST00000298260 WDR89Q96FK6 387 aaPredicted RBP12.81□□□□□ -0.36
SKA3-201ENST00000298260 ART5Q96L15 291 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 FRG2BQ96QU4 278 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 SLC32A1Q9H598 525 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 SPATA6Q9NWH7 488 aaPredicted RBP12.81□□□□□ -0.36
SKA3-201ENST00000298260 HCN2Q9UL51 889 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 SF3B6Q9Y3B4 125 aaKnown RBP12.81□□□□□ -0.36
SKA3-201ENST00000298260 PCDHB7Q9Y5E2 793 aa12.81□□□□□ -0.36
SKA3-201ENST00000298260 KCNJ13O60928 360 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 NTN1O95631 604 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 C6orf47O95873 294 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 ANXA3P12429 323 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 ATF6P18850 670 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 GBX2P52951 348 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 ERVFC1P60507 584 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 RAB14P61106 215 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 SRSF11Q05519 484 aaKnown RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 TAF12Q16514 161 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 PLA1AQ53H76 456 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 ZNF770Q6IQ21 691 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 METTL23Q86XA0 190 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 MARCH9Q86YJ5 346 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 VRK3Q8IV63 474 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 GPALPP1Q8IXQ4 340 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 OR8D4Q8NGM9 314 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 TMEM163Q8TC26 289 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CREB3L1Q96BA8 519 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 WBP1Q96G27 269 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 RADILQ96JH8 1075 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 RNF32Q9H0A6 362 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 GHITMQ9H3K2 345 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 FZD3Q9NPG1 666 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 IL17CQ9P0M4 197 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 MRPS7Q9Y2R9 242 aaKnown RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 ZFP37Q9Y6Q3 630 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 GAPDHSO14556 408 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 PI15O43692 258 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 IFNA7P01567 189 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 ANXA5P08758 320 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 HSD3B1P14060 373 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CPEP16870 476 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CELP19835 753 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CHI3L1P36222 383 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 CSNK1DP48730 415 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 SELENOPP49908 381 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CACNG1Q06432 222 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CAMK2DQ13557 499 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 TAF1CQ15572 869 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 KCNA10Q16322 511 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CCL14Q16627 93 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CCNJQ5T5M9 372 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 ACSM5Q6NUN0 579 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 CD300LGQ6UXG3 332 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 DEF8Q6ZN54 512 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 UBE2Q1Q7Z7E8 422 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 ADGRG3Q86Y34 549 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 NPAS3Q8IXF0 933 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 OR10Z1Q8NGY1 313 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 PIGKQ92643 395 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 MRPS31Q92665 395 aaKnown RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 C12orf66Q96MD2 445 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 COQ10AQ96MF6 247 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 SAMD11Q96NU1 681 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 SLC35A5Q9BS91 424 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 TM6SF2Q9BZW4 377 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 OR51J1Q9H342 316 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 GPBP1L1Q9HC44 474 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 CUEDC1Q9NWM3 386 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 SDHAF2Q9NX18 166 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 KCTD5Q9NXV2 234 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 HCN3Q9P1Z3 774 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 RPL36Q9Y3U8 105 aaKnown RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 HRH3Q9Y5N1 445 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 TEX13CA0A0J9YWL9 993 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 GNG14A0A1W2PPG7 69 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 SLC30A4O14863 429 aa12.8□□□□□ -0.36
SKA3-201ENST00000298260 KHNYNO15037 678 aaKnown RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 GATBO75879 557 aaKnown RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 PIPP12273 146 aaPredicted RBP12.8□□□□□ -0.36
SKA3-201ENST00000298260 ZNF7P17097 686 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms