RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 DOC2AQ14183 400 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 CDKN3Q16667 212 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 PRSS53Q2L4Q9 553 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 RPS26P11Q5JNZ5 115 aaPredicted RBP10.79□□□□□ -0.68
SCLT1-201ENST00000281142 IER5LQ5T953 404 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 CEACAM20Q6UY09 585 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 TCEANCQ8N8B7 351 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 ZFP41Q8N8Y5 198 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 HJURPQ8NCD3 748 aaPredicted RBP10.79□□□□□ -0.68
SCLT1-201ENST00000281142 BTN2A2Q8WVV5 523 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 SLC35A5Q9BS91 424 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.79□□□□□ -0.68
SCLT1-201ENST00000281142 NDUFB11Q9NX14 153 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 COMMD3Q9UBI1 195 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 SSR3Q9UNL2 185 aa10.79□□□□□ -0.68
SCLT1-201ENST00000281142 LOC102723532A0A0G2JNH3 316 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 A0A1B0GVM2 712 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 GNG14A0A1W2PPG7 69 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TRBC2A0A5B9 178 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 H3BUI4 141 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 LRG1P02750 347 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 HIST1H2AGP0C0S8 130 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 HIST1H2ADP20671 130 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ERP29P30040 261 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 RPS25P62851 125 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TEKQ02763 1124 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 CCSMST1Q4G0I0 132 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 OR2G6Q5TZ20 316 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 XKRXQ6PP77 449 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PLET1Q6UQ28 207 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 Q7L0L9 218 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 DNAJB7Q7Z6W7 309 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PDZD3Q86UT5 571 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 FAM46DQ8NEK8 389 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 WDR20Q8TBZ3 569 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PCNPQ8WW12 178 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 HIST1H2AHQ96KK5 128 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TM9SF2Q99805 663 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 HIST1H2AJQ99878 128 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 WFDC6Q9BQY6 131 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 H2AFJQ9BTM1 129 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TSSK6Q9BXA6 273 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 SLC12A9Q9BXP2 914 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 HCFC1R1Q9NWW0 138 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 CD84Q9UIB8 345 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 COL6A3P12111 3177 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 SH3D21A4FU49 640 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 NRG2O14511 850 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PDPK1O15530 556 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 SEMA7AO75326 666 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 NCR1O76036 304 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ICAM2P13598 275 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ATF4P18848 351 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 IL32P24001 234 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PRIM2P49643 509 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 EPHB3P54753 998 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PLD1Q13393 1074 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 GCNT6Q5T4J0 391 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ZNF770Q6IQ21 691 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TCTE3Q8IZS6 198 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TAGAPQ8N103 731 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 MMP21Q8N119 569 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 C12orf76Q8N812 135 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ASB11Q8WXH4 323 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 KLHL6Q8WZ60 621 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TMEM80Q96HE8 168 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 NELL2Q99435 816 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ZNF334Q9HCZ1 680 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 GLTPQ9NZD2 209 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 EIF3KQ9UBQ5 218 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 RUVBL1Q9Y265 456 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 CKAP5Q14008 2032 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PLXNB3Q9ULL4 1909 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 A8MUA0 341 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 HEPACAM2A8MVW5 462 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 H3BN98 237 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TBL1XO60907 577 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PRKACAP17612 351 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 SDHBP21912 280 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ITGB7P26010 798 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 CD79BP40259 229 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ETV5P41161 510 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 CSKP41240 450 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 MAP2K3P46734 347 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ETV1P50549 477 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 RPS26P62854 115 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 PUM1Q14671 1186 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 TEAD4Q15561 434 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 MPEG1Q2M385 716 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ATAT1Q5SQI0 421 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 MEX3DQ86XN8 651 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 RBM45Q8IUH3 476 aaKnown RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 HS6ST3Q8IZP7 471 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 APCDD1Q8J025 514 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 NANOGP1Q8N7R0 232 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 OR52P1PQ8NH57 321 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 C11orf24Q96F05 449 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-201ENST00000281142 MED8Q96G25 268 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms