RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 NATD1Q8N6N6 113 aa23.19■■□□□ 1.3
SSBP4-201ENST00000270061 GOT1L1Q8NHS2 421 aaPredicted RBP23.19■■□□□ 1.3
SSBP4-201ENST00000270061 MAGEL2Q9UJ55 1249 aa23.19■■□□□ 1.3
SSBP4-201ENST00000270061 ERVK-11Q9UQG0 969 aa23.19■■□□□ 1.3
SSBP4-201ENST00000270061 KLHL20Q9Y2M5 609 aa23.19■■□□□ 1.3
SSBP4-201ENST00000270061 FER1L5A0AVI2 2057 aa23.19■■□□□ 1.3
SSBP4-201ENST00000270061 A0A0A6YYD5 115 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 C21orf140B9A014 251 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 TERTO14746 1132 aaKnown RBP23.18■■□□□ 1.3
SSBP4-201ENST00000270061 ITGA1P56199 1179 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 CDC20Q12834 499 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 DNASE1L3Q13609 305 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 FBXO42Q6P3S6 717 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 FIGLAQ6QHK4 219 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 PQLC1Q8N2U9 271 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 SLC38A9Q8NBW4 561 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 CT55Q8WUE5 264 aa23.18■■□□□ 1.3
SSBP4-201ENST00000270061 AKIRIN1Q9H9L7 192 aaPredicted RBP23.18■■□□□ 1.3
SSBP4-201ENST00000270061 CASQ2O14958 399 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-201ENST00000270061 GSNP06396 782 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 KLK3P07288 261 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-201ENST00000270061 DDX5P17844 614 aaKnown RBP23.17■■□□□ 1.3
SSBP4-201ENST00000270061 DDCP20711 480 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 GZMMP51124 257 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 STXBP1P61764 594 aaKnown RBP23.17■■□□□ 1.3
SSBP4-201ENST00000270061 HEPACAMQ14CZ8 416 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 CRTC2Q53ET0 693 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-201ENST00000270061 FCRL6Q6DN72 434 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 ABHD17CQ6PCB6 329 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 FAM199XQ6PEV8 388 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-201ENST00000270061 BORAQ6PGQ7 559 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 SPPL2CQ8IUH8 684 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 GPR135Q8IZ08 494 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 CLECL1Q8IZS7 167 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 OR2T12Q8NG77 320 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 OR2L5Q8NG80 312 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 OR10A6Q8NH74 314 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 NT5CQ8TCD5 201 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 CLIP3Q96DZ5 547 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 LRFN5Q96NI6 719 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 KCNC2Q96PR1 638 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 SEMA4CQ9C0C4 833 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 SLC7A5P2Q9GIP4 190 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 SLC6A16Q9GZN6 736 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 KLHL31Q9H511 634 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 AP4S1Q9Y587 144 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 EVPLLA8MZ36 301 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 C1QL1O75973 258 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 MAGP20916 626 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 MR1Q95460 341 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 TM4SF19Q96DZ7 209 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 TBCDQ9BTW9 1192 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 SYNPO2LQ9H987 977 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 PRDM7Q9NQW5 492 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 USP22Q9UPT9 525 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 PCDHGA6Q9Y5G7 932 aa23.17■■□□□ 1.3
SSBP4-201ENST00000270061 FAM220BPB1ANY3 271 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 CPSF4O95639 269 aaKnown RBP23.16■■□□□ 1.3
SSBP4-201ENST00000270061 GGT1P19440 569 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 PLA2G16P53816 162 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 C19orf57Q0VDD7 668 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 DEFB110Q30KQ9 67 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 GLYATQ6IB77 296 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 ZNF621Q6ZSS3 439 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 VN1R4Q7Z5H5 301 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 SLCO4A1Q96BD0 722 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 OR2A5Q96R48 311 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 GORASP2Q9H8Y8 452 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 MIEF1Q9NQG6 463 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 CCM2LQ9NUG4 571 aaPredicted RBP23.16■■□□□ 1.3
SSBP4-201ENST00000270061 ARMC1Q9NVT9 282 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 CCDC88CQ9P219 2028 aa23.16■■□□□ 1.3
SSBP4-201ENST00000270061 MEN1O00255 615 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 CLIC1O00299 241 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 TMPRSS11DO60235 418 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 FAM87AP0C7U9 286 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 UMPSP11172 480 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 GPX2P18283 190 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 PPIBP23284 216 aaKnown RBP23.15■■□□□ 1.3
SSBP4-201ENST00000270061 SSR2P43308 183 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 MPEG1Q2M385 716 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 MUM1Q2TAK8 710 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 MTX3Q5HYI7 312 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 TOR1AIP1Q5JTV8 583 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 ZNF517Q6ZMY9 492 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-201ENST00000270061 ASPGQ86U10 573 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 ZCCHC7Q8N3Z6 543 aaKnown RBP23.15■■□□□ 1.3
SSBP4-201ENST00000270061 EXD3Q8N9H8 876 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 FAM47BQ8NA70 645 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 OR52E4Q8NGH9 312 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 AURKBQ96GD4 344 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-201ENST00000270061 C17orf62Q9BQA9 187 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 GPR87Q9BY21 358 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 PIF1Q9H611 641 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 ZNF282Q9UDV7 671 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-201ENST00000270061 LRRC42Q9Y546 428 aa23.15■■□□□ 1.3
SSBP4-201ENST00000270061 MDC1Q14676 2089 aaKnown RBP23.15■■□□□ 1.3
SSBP4-201ENST00000270061 ZNF462Q96JM2 2506 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 TCRBV5S2A0A599 114 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 C1orf226A1L170 272 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms