RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CBX5P45973 191 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 SLC6A9P48067 706 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF41P51814 821 aaPredicted RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 CDH24Q86UP0 819 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 RASGEF1AQ8N9B8 481 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 STRADBQ9C0K7 418 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 MED28Q9H204 178 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 KCNK12Q9HB15 430 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 DKK3Q9UBP4 350 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 RNF6Q9Y252 685 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 FKBP7Q9Y680 259 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ANHXE9PGG2 379 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 TRAPPC6AO75865 159 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 DBIP07108 87 aaKnown RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 FESP07332 822 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 T-ENOLP0DO92 83 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 PAGE3Q5JUK9 113 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 OR8J1Q8NGP2 316 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 OR51A7Q8NH64 312 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 THEM6Q8WUY1 208 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 C12orf43Q96C57 262 aaKnown RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ECHDC3Q96DC8 303 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 TMEM19Q96HH6 336 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 GFM1Q96RP9 751 aaKnown RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 DEFB126Q9BYW3 111 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 MCCC2Q9HCC0 563 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 DNMT3AQ9Y6K1 912 aaPredicted RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 FAM172BPA6NC97 362 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 PROM1O43490 865 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 CACNG3O60359 315 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 NOS1APO75052 506 aaPredicted RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF20P17024 532 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ENDOUP21128 410 aaKnown RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 FBLP22087 321 aaKnown RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ELK4P28324 431 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 RNF144AP50876 292 aaPredicted RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 PITPNAQ00169 270 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 PLGLB1Q02325 96 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 LRP8Q14114 963 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 SMCO1Q147U7 214 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 SLC36A3Q495N2 470 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 RNF111Q6ZNA4 994 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 LINGO2Q7L985 606 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 VTCN1Q7Z7D3 282 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 OR2L2Q8NH16 312 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF480Q8WV37 535 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ASB11Q8WXH4 323 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 TMED9Q9BVK6 235 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 NCDNQ9UBB6 729 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF221Q9UK13 617 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 HCN2Q9UL51 889 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 PCDHGA7Q9Y5G6 932 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ENTPD2Q9Y5L3 495 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 A0A1W2PPW3 197 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 CSTF1Q05048 431 aaKnown RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 NPRL3Q12980 569 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 CTSL3PQ5NE16 218 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 C1orf189Q5VU69 101 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 LARP4Q71RC2 724 aaKnown RBP eCLIP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 OR2T33Q8NG76 320 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 FBXO27Q8NI29 283 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 TM9SF2Q99805 663 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 FTSJ1Q9UET6 329 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 SDC1P18827 310 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 CTBSQ01459 385 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 QSOX2Q6ZRP7 698 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 LNX2Q8N448 690 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 ANKFN1Q8N957 763 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 VN1R2Q8NFZ6 395 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 OR51G2Q8NGK0 314 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 GPR89AB7ZAQ6 455 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 H0YJX3 145 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 GPR37L1O60883 481 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 ENTPD6O75354 484 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 GABBR2O75899 941 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 GPR89BP0CG08 455 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 HOXA9P31269 272 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 RPS3AP61247 264 aaKnown RBP14.68□□□□□ -0.06
TIMP3-201ENST00000266085 MRPS21P82921 87 aaKnown RBP14.68□□□□□ -0.06
TIMP3-201ENST00000266085 CBLBQ13191 982 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 ARHGAP19Q14CB8 494 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 TCTE1Q5JU00 501 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 FIGNL1Q6PIW4 674 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 CHERPQ8IWX8 916 aaKnown RBP14.68□□□□□ -0.06
TIMP3-201ENST00000266085 FANK1Q8TC84 345 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 TRIM43Q96BQ3 446 aaPredicted RBP14.68□□□□□ -0.06
TIMP3-201ENST00000266085 MRPL38Q96DV4 380 aaKnown RBP14.68□□□□□ -0.06
TIMP3-201ENST00000266085 PDLIM5Q96HC4 596 aaKnown RBP14.68□□□□□ -0.06
TIMP3-201ENST00000266085 RARRES3Q9UL19 164 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 MKLN1Q9UL63 735 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 ARID1BQ8NFD5 2236 aaPredicted RBP14.68□□□□□ -0.06
TIMP3-201ENST00000266085 CBLP22681 906 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 F8A1P23610 371 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 HSD11B1P28845 292 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 PRLHRP49683 370 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 MS4A2Q01362 244 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 MRPL58Q14197 206 aaKnown RBP14.68□□□□□ -0.06
TIMP3-201ENST00000266085 TMEM31Q5JXX7 168 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 LCTLQ6UWM7 567 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 ENPP6Q6UWR7 440 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms