RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SNX8Q9Y5X2 465 aa9.14□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF780BQ9Y6R6 833 aa9.14□□□□□ -0.95
SNRNP40-201ENST00000263694 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.14□□□□□ -0.95
SNRNP40-201ENST00000263694 TRBV5-3A0A0A0MS03 114 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 A8MUA0 341 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 CTNSO60931 367 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 PDE5AO76074 875 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 TNFSF15O95150 251 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 HBQ1P09105 142 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 CPMP14384 443 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 PORP16435 677 aaPredicted RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC6A2P23975 617 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 NTSP30990 170 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 SOAT1P35610 550 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 SOX18P35713 384 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 SOX11P35716 441 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 TRPC1P48995 793 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 RAB15P59190 212 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 MRPS35P82673 323 aaKnown RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 RUNDC3AQ59EK9 446 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 C8orf82Q6P1X6 216 aaPredicted RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 FAM111BQ6SJ93 734 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 HACD2Q6Y1H2 254 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 MSANTD1Q6ZTZ1 278 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 TMPRSS12Q86WS5 348 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC15A3Q8IY34 581 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF595Q8IYB9 648 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 C10orf111Q8N326 155 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 FAM156AQ8NDB6 213 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 STT3BQ8TCJ2 826 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 ADAMTS14Q8WXS8 1223 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 OR5P2Q8WZ92 322 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 UTP4Q969X6 686 aaKnown RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 ROPN1LQ96C74 230 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 ZBED6CLQ96FA7 236 aaPredicted RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF764Q96H86 408 aaPredicted RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 PTCHD1Q96NR3 888 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 ALOXE3Q9BYJ1 711 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 C1orf21Q9H246 121 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 SOX17Q9H6I2 414 aaPredicted RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 CLK4Q9HAZ1 481 aaKnown RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 GIMAP4Q9NUV9 329 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 CMTM6Q9NX76 183 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 TAS2R9Q9NYW1 312 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 ADA2Q9NZK5 511 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 IFT80Q9P2H3 777 aaPredicted RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF282Q9UDV7 671 aaPredicted RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 USP22Q9UPT9 525 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 MRPS33Q9Y291 106 aaKnown RBP9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 SPTBN4Q9H254 2564 aa9.13□□□□□ -0.95
SNRNP40-201ENST00000263694 NME4O00746 187 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 CLDN4O14493 209 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 NVLO15381 856 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 HNRNPCL1O60812 293 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 ERN1O75460 977 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 DNAJC8O75937 253 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 RECKO95980 971 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 CT62P0C5K7 136 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 ZGLP1P0C6A0 271 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 MPIP34949 423 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 GPC1P35052 558 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 PGM1P36871 562 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 RASSF2P50749 326 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC7A2P52569 658 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 GABREP78334 506 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 RHAGQ02094 409 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 STX4Q12846 297 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 CEBPEQ15744 281 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 NKG7Q16617 165 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 TRMT12Q53H54 448 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 LRIF1Q5T3J3 769 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 CYB5D1Q6P9G0 228 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 TMEM107Q6UX40 140 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 C16orf89Q6UX73 402 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 LANCL3Q6ZV70 420 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 OVCH1Q7RTY7 1134 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 SCUBE1Q8IWY4 988 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 PGAM4Q8N0Y7 254 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 LRRC25Q8N386 305 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 GOT1L1Q8NHS2 421 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 TMEM125Q96AQ2 219 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 ANKRD27Q96NW4 1050 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 OR1F2PQ96R84 312 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 DDA1Q9BW61 102 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 ASPSCR1Q9BZE9 553 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 SPRY4Q9C004 299 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 VN1R1Q9GZP7 353 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 MKKSQ9NPJ1 570 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 ACSS1Q9NUB1 689 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 MKL2Q9ULH7 1088 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 VPS4AQ9UN37 437 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 PCDHGB4Q9UN71 923 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 IGLV3-12A0A075B6K2 115 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 HRKO00198 91 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 CLIC1O00299 241 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 DLGAP3O95886 979 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 KLK3P07288 261 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 TCN1P20061 433 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 AGXTP21549 392 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms