RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TIMM29Q9BSF4 260 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 DNAAF2Q9NVR5 837 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TAC3Q9UHF0 121 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ENOPH1Q9UHY7 261 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 DAPP1Q9UN19 280 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ARL2BPQ9Y2Y0 163 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 GXYLT2A0PJZ3 443 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SNTNA6NMZ2 147 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 QSOX1O00391 747 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SIGLEC6O43699 453 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 PCDHGA12O60330 932 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 MAGEC1O60732 1142 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ADH1CP00326 375 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 NAE1Q13564 534 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 DEFB133Q30KQ1 61 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 HLA-BQ31612 363 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ZRANB3Q5FWF4 1079 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC30A9Q6PML9 568 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ZC3H7AQ8IWR0 971 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 D2HGDHQ8N465 521 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 IMMP1LQ96LU5 166 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 RILPQ96NA2 401 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ARMC7Q9H6L4 198 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 MID1IP1Q9NPA3 183 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM86C1Q9NVL1 165 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 CPNE7Q9UBL6 633 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 FTSJ1Q9UET6 329 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 CORO1CQ9ULV4 474 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 MAP4K5Q9Y4K4 846 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC22A7Q9Y694 548 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SPG11Q96JI7 2443 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 DIDO1Q9BTC0 2240 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 TGFBR2P37173 567 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 MAPK8P45983 427 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ARL4DP49703 201 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 RIPPLY1Q0D2K3 151 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 HIST2H2ACQ16777 129 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 VWA2Q5GFL6 755 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 MTX3Q5HYI7 312 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 IRAK1BP1Q5VVH5 260 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 HIST2H2AA3Q6FI13 130 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 UBE2R2Q712K3 238 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC46A3Q7Z3Q1 461 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 CTAGE3PQ8IX95 158 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 GANCQ8TET4 914 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 TSLPQ969D9 159 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 PRRG3Q9BZD7 231 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 RPRD1BQ9NQG5 326 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 CHCHD3Q9NX63 227 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 OR5K3A6NET4 321 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 XYLBO75191 536 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 MT-ND3P03897 115 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 PRKACGP22612 351 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 AVPR2P30518 371 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 PTDSS1P48651 473 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 MSMPQ1L6U9 139 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 DCST1Q5T197 706 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 Q8NA96 180 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 TFAP2CQ92754 450 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 DIO2Q92813 273 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 RAD21L1Q9H4I0 556 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 DCAF13Q9NV06 445 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 SF3B6Q9Y3B4 125 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 TLR4O00206 839 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 TNFRSF10CO14798 259 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 CAPN5O15484 640 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 AGXTP21549 392 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 HNRNPA2B1P22626 353 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ATXN3P54252 364 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 RPS21P63220 83 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 OTPQ5XKR4 325 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 HACD2Q6Y1H2 254 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 QSOX2Q6ZRP7 698 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ATCAYQ86WG3 371 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 C1orf52Q8N6N3 182 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF248Q8NDW4 579 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 OR14C36Q8NHC7 312 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 PRPF18Q99633 342 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 UBQLN3Q9H347 655 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 TRNAU1APQ9NX07 287 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF226Q9NYT6 803 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 B3GAT1Q9P2W7 334 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC25A13Q9UJS0 675 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 HS3ST3A1Q9Y663 406 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ALMS1Q8TCU4 4167 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ZC3H12DA2A288 527 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 GGT1P19440 569 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 MAOAP21397 527 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC2A5P22732 501 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 COL8A2P25067 703 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 RPS11P62280 158 aaKnown RBP eCLIP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ABHD18Q0P651 414 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 FUT7Q11130 342 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 GUSBP1Q15486 140 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 TIGD2Q4W5G0 525 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 CACHD1Q5VU97 1274 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 H3F3CQ6NXT2 135 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 C11orf88Q6PI97 169 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 NUDCD3Q8IVD9 361 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms