RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 NLRC3Q7RTR2 1065 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 TRMT11Q7Z4G4 463 aaKnown RBP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 MILR1Q7Z6M3 343 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 ACOT1Q86TX2 421 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 PDZD9Q8IXQ8 264 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 ENTHD1Q8IYW4 607 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 LNX2Q8N448 690 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 TAB3Q8N5C8 712 aaPredicted RBP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 OR11H4Q8NGC9 324 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 AP3S1Q92572 193 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 SERINC2Q96SA4 455 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 TRIM62Q9BVG3 475 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 ASPNQ9BXN1 380 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 CEP41Q9BYV8 373 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 METTL9Q9H1A3 318 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 ABCG8Q9H221 673 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 TASP1Q9H6P5 420 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 SDR39U1Q9NRG7 319 aaPredicted RBP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 CISHQ9NSE2 258 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 PCDHB10Q9UN67 800 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 PCDHB9Q9Y5E1 797 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 ACOD1A6NK06 481 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 DLX3O60479 287 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 CILPO75339 1184 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 KRT33AO76009 404 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 IL1AP01583 271 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 RHOP08100 348 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 FPR3P25089 353 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 PBLDP30039 288 aaPredicted RBP11.27□□□□□ -0.6
CCNA1-201ENST00000255465 GRK5P34947 590 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 GPR15P49685 360 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 DSC2Q02487 901 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF284Q2VY69 593 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 SAPCD1Q5SSQ6 148 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 TXNRD3NBQ6F5E7 133 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 FSTL4Q6MZW2 842 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 SPESP1Q6UW49 350 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 AHSA2Q719I0 299 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 SPAG16Q8N0X2 631 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 IPMKQ8NFU5 416 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 NR4A3Q92570 626 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 RFT1Q96AA3 541 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 MRGPRX2Q96LB1 330 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 MCEEQ96PE7 176 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 SOSTQ9BQB4 213 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 NT5C1AQ9BXI3 368 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 B3GNT5Q9BYG0 378 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 EVA1AQ9H8M9 152 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 SLC52A3Q9NQ40 469 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 GTSE1Q9NYZ3 720 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 SPASTQ9UBP0 616 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 AASSQ9UDR5 926 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.6
CCNA1-201ENST00000255465 PATJQ8NI35 1801 aa11.27□□□□□ -0.6
CCNA1-201ENST00000255465 FAM234BA2RU67 622 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 FAM86C2PA6NEL3 165 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 LOC730098B7Z3J9 87 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 CLDN5O00501 218 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 NOBOXO60393 691 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 RECQL5O94762 991 aaPredicted RBP11.27□□□□□ -0.61
CCNA1-201ENST00000255465 GP1BAP07359 652 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 SBK2P0C263 348 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 SBK3P0C264 359 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 G6PDP11413 515 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 NOS3P29474 1203 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 MATKP42679 507 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 MAGEA2P43356 314 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 PIK3CGP48736 1102 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 ATXN1P54253 815 aaKnown RBP11.27□□□□□ -0.61
CCNA1-201ENST00000255465 PPP3R1P63098 170 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 DCDP81605 110 aaKnown RBP11.27□□□□□ -0.61
CCNA1-201ENST00000255465 E2F1Q01094 437 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 PRSS36Q5K4E3 855 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 HEATR6Q6AI08 1181 aaKnown RBP11.27□□□□□ -0.61
CCNA1-201ENST00000255465 POMZP3Q6PJE2 187 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 FGD2Q7Z6J4 655 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 DNAJB7Q7Z6W7 309 aaPredicted RBP11.27□□□□□ -0.61
CCNA1-201ENST00000255465 CMC1Q7Z7K0 106 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 LAX1Q8IWV1 398 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 ARMC10Q8N2F6 343 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 SVBPQ8N300 66 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
CCNA1-201ENST00000255465 OR6X1Q8NH79 312 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 KAT2AQ92830 837 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 PSMG2Q969U7 264 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 SCRN2Q96FV2 425 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 VAT1Q99536 393 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 TMPRSS13Q9BYE2 586 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 ELOVL4Q9GZR5 314 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 SAP130Q9H0E3 1048 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 FAM124BQ9H5Z6 455 aaPredicted RBP11.27□□□□□ -0.61
CCNA1-201ENST00000255465 RNF122Q9H9V4 155 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 TP53TG5Q9Y2B4 290 aa11.27□□□□□ -0.61
CCNA1-201ENST00000255465 CLCA1A8K7I4 914 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 C2CD4DB7Z1M9 353 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 ZNF670-ZNF695F2Z2N8 137 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms