RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 OR12D1P0DN82 309 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 ACADMP11310 421 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 SRFP11831 508 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 CLDN2P57739 230 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 ZNF829Q3KNS6 432 aaPredicted RBP17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 FBXO43Q4G163 708 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 PTCRAQ6ISU1 281 aaPredicted RBP17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 TMEM145Q8NBT3 493 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 OR4D11Q8NGI4 311 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 RHOXF1Q8NHV9 184 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 ALPK1Q96QP1 1244 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 APOOQ9BUR5 198 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 CCNB1IP1Q9NPC3 277 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 SH3PXD2BA1X283 911 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 OR2A25A4D2G3 310 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 PRR19A6NJB7 356 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 ERI3O43414 337 aaKnown RBP17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 IL9P15248 144 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 RHCEP18577 417 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 TEAD1P28347 426 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 RPE65Q16518 533 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 LEXMQ3ZCV2 418 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 EOGTQ5NDL2 527 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 COMTD1Q86VU5 262 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 P2RY8Q86VZ1 359 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 CROCCP3Q8IVE0 287 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 FLCNQ8NFG4 579 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 IPCEF1Q8WWN9 437 aaPredicted RBP17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 BORCS5Q969J3 196 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 FAM131CQ96AQ9 280 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 AMDHD1Q96NU7 426 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 PITHD1Q9GZP4 211 aaPredicted RBP17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 ZNF556Q9HAH1 456 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 NMNAT1Q9HAN9 279 aaPredicted RBP17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 GALNT8Q9NY28 637 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 GPR83Q9NYM4 423 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 WBP11Q9Y2W2 641 aaKnown RBP17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 HCN4Q9Y3Q4 1203 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 POM121BA6NF01 834 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 PGRMC2O15173 223 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 NDUFV2P19404 249 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 CBLP22681 906 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 GPC1P35052 558 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 PXNP49023 591 aaPredicted RBP17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 NCBP2P52298 156 aaKnown RBP eCLIP17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 C21orf59P57076 290 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 NCS1P62166 190 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 KCNC4Q03721 635 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 UAP1L1Q3KQV9 507 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 KLHL17Q6TDP4 642 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 LACC1Q8IV20 430 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 SVOPQ8N4V2 548 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 DNAJC22Q8N4W6 341 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 YIPF4Q9BSR8 244 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 OR51I1Q9H343 314 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 PSORS1C1Q9UIG5 152 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 ADAM29Q9UKF5 820 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 SCML1Q9UN30 329 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 NCKAP1Q9Y2A7 1128 aa17.69■□□□□ 0.42
PDLIM4-201ENST00000253754 H0Y8X5 98 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 SLC28A2O43868 658 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 ERAL1O75616 437 aaKnown RBP17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 GABRB1P18505 474 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 OPRL1P41146 370 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 ST13P50502 369 aaKnown RBP17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 HMGA2P52926 109 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 PRKAG1P54619 331 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 DUSP2Q05923 314 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 SLAMF1Q13291 335 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 SEC23BQ15437 767 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 GPR19Q15760 415 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 DEF8Q6ZN54 512 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 DGLUCYQ7Z3D6 616 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 SLC30A8Q8IWU4 369 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 TAGAPQ8N103 731 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 OR2L3Q8NG85 312 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 XAGE5Q8WWM1 108 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 GGHQ92820 318 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 MS4A6EQ96DS6 147 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 PLEKHA8Q96JA3 519 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 COL21A1Q96P44 957 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 ATG4BQ9Y4P1 393 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 TCRBV21S2A2A0A5A6 115 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 PRICKLE3O43900 615 aaPredicted RBP17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 C8orf89P0DMQ9 161 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 TGFBR2P37173 567 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 RAB8AP61006 207 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 PTGES3Q15185 160 aaKnown RBP17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 ZIC1Q15915 447 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 SYT16Q17RD7 645 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 TMEM31Q5JXX7 168 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 TCTN3Q6NUS6 607 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 Q6ZS52 159 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 ABTB1Q969K4 478 aaPredicted RBP17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 FCRL4Q96PJ5 515 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 TREX2Q9BQ50 279 aaPredicted RBP17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 SLC35C2Q9NQQ7 365 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 SLC2A4RGQ9NR83 387 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 KCND3Q9UK17 655 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms