RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 SEMG1P04279 462 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 ANXA4P09525 319 aaPredicted RBP16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 IGFBP5P24593 272 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 DAPP51397 102 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 NHLH1Q02575 133 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 PCDH1Q08174 1060 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 NR1D2Q14995 579 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 HIST2H2ACQ16777 129 aaPredicted RBP16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 PAGE2BQ5JRK9 111 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 GTF2IRD2BQ6EKJ0 949 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 HIST2H2AA3Q6FI13 130 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 GTF2IRD2Q86UP8 949 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 RCBTB1Q8NDN9 531 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 NAT6Q93015 286 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 TBC1D20Q96BZ9 403 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 THAP11Q96EK4 314 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 WDR34Q96EX3 536 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 TPT1P8Q9HAU6 139 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 BRF2Q9HAW0 419 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 TMEM184CQ9NVA4 438 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 PAK1IP1Q9NWT1 392 aaPredicted RBP16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 ORC6Q9Y5N6 252 aa16.04■□□□□ 0.16
CDKN1A-201ENST00000244741 CNOT1A5YKK6 2376 aaKnown RBP16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 MYO1GB0I1T2 1018 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 BCKDKO14874 412 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 TGFB1P01137 390 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 CTSBP07858 339 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 NUDT7P0C024 238 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 HSD3B1P14060 373 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 HSD3B2P26439 372 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 RYKP34925 604 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 TMBIM6P55061 237 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 GABARAPL2P60520 117 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 GPLD1P80108 840 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 VLDLRP98155 873 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 REEP5Q00765 189 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 RAPSNQ13702 412 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 TUBA3CQ13748 450 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 KCNAB1Q14722 419 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 SLC5A12Q1EHB4 618 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 HKDC1Q2TB90 917 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 RFX4Q33E94 735 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 INAVAQ3KP66 663 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 STPG1Q5TH74 334 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 ZNF425Q6IV72 752 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 FBXO42Q6P3S6 717 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 ERICH5Q6P6B1 374 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 ZNF574Q6ZN55 896 aaPredicted RBP16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 VN1R5Q7Z5H4 357 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 PAQR7Q86WK9 346 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 KRT78Q8N1N4 520 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 PIK3C3Q8NEB9 887 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 OR6C4Q8NGE1 309 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 CHTF18Q8WVB6 975 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 RNF31Q96EP0 1072 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 ZDHHC12Q96GR4 267 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 GABARAPL1Q9H0R8 117 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 SNX7Q9UNH6 387 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 PCNX2A6NKB5 2137 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 PTGES3LE9PB15 166 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 SLC1A7O00341 560 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 LRP3O75074 770 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 ITGAMP11215 1152 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 GRK3P35626 688 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 CLDN6P56747 220 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 RPS13P62277 151 aaKnown RBP16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 NFATC3Q12968 1075 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 CDK5R2Q13319 367 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 TOP3AQ13472 1001 aaPredicted RBP16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 E2F2Q14209 437 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 CPTPQ5TA50 214 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 FRMPD2BQ6IN97 320 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 CNIH3Q8TBE1 160 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 FBLIM1Q8WUP2 373 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 TANKQ92844 425 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 HSH2DQ96JZ2 352 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 CSF3RQ99062 836 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 SEMA6CQ9H3T2 930 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 LRRN3Q9H3W5 708 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 PLGRKTQ9HBL7 147 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 SOHLH2Q9NX45 425 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 RPS6KA6Q9UK32 745 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 BLOC1S6Q9UL45 172 aa16.03■□□□□ 0.16
CDKN1A-201ENST00000244741 CEP250Q9BV73 2442 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 hCG_2014768A0A024R1R8 64 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 LOC105369274A0A096LPK9 316 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 LOC102723532A0A0G2JNH3 316 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 NOL3O60936 208 aaKnown RBP16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 FABP3P05413 133 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 CYP4B1P13584 511 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 CCNA2P20248 432 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 PLA2G16P53816 162 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 CBLL1Q75N03 491 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 EIF3MQ7L2H7 374 aaKnown RBP16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 PLXDC1Q8IUK5 500 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 ZC3H7AQ8IWR0 971 aaKnown RBP16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 OR4N4Q8N0Y3 316 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 BAHD1Q8TBE0 780 aaPredicted RBP16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 TBC1D15Q8TC07 691 aa16.02■□□□□ 0.16
CDKN1A-201ENST00000244741 NRBF2Q96F24 287 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms