RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 DNAJA4Q8WW22 397 aaPredicted RBP8.84□□□□□ -1
SRSF6-201ENST00000244020 SSX3Q99909 188 aa8.84□□□□□ -1
SRSF6-201ENST00000244020 RIOK2Q9BVS4 552 aaKnown RBP8.84□□□□□ -1
SRSF6-201ENST00000244020 TMEM168Q9H0V1 697 aa8.84□□□□□ -1
SRSF6-201ENST00000244020 IL26Q9NPH9 171 aa8.84□□□□□ -1
SRSF6-201ENST00000244020 CD93Q9NPY3 652 aa8.84□□□□□ -1
SRSF6-201ENST00000244020 PCDHB8Q9UN66 801 aa8.84□□□□□ -1
SRSF6-201ENST00000244020 ANGPT4Q9Y264 503 aa8.84□□□□□ -1
SRSF6-201ENST00000244020 FNDC1Q4ZHG4 1894 aaPredicted RBP8.83□□□□□ -1
SRSF6-201ENST00000244020 CPSF4LA6NMK7 179 aaKnown RBP8.83□□□□□ -1
SRSF6-201ENST00000244020 IL1AP01583 271 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 OR56A5P0C7T3 313 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 RD3LP0DJH9 198 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 DNASE1P24855 282 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 ACRV1P26436 265 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 RRAS2P62070 204 aaPredicted RBP8.83□□□□□ -1
SRSF6-201ENST00000244020 S100A12P80511 92 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 RBBP4Q09028 425 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 EIF2S3LQ2VIR3 472 aaKnown RBP8.83□□□□□ -1
SRSF6-201ENST00000244020 COX20Q5RI15 118 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 DCST1Q5T197 706 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 IDNKQ5T6J7 187 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 MTFR2Q6P444 385 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 GPC2Q8N158 579 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 FUBP3Q96I24 572 aaKnown RBP eCLIP8.83□□□□□ -14e-14■■□□□ 13.7
SRSF6-201ENST00000244020 UROC1Q96N76 676 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 HTATIP2Q9BUP3 242 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 BCL2L14Q9BZR8 327 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 ZNF350Q9GZX5 532 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 RDH14Q9HBH5 336 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 SLAMF7Q9NQ25 335 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 MIEF1Q9NQG6 463 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 SCAMP2O15127 329 aaKnown RBP8.83□□□□□ -1
SRSF6-201ENST00000244020 PLA2G10O15496 165 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 TPST2O60704 377 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 SRCP12931 536 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 ARSBP15848 533 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 ZNF3P17036 446 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 GABRB1P18505 474 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 DDX6P26196 483 aaKnown RBP eCLIP8.83□□□□□ -12e-6■□□□□ 8.3
SRSF6-201ENST00000244020 NSG1P42857 185 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 OMPP47874 163 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 TEKQ02763 1124 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 MTAPQ13126 283 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 CDONQ4KMG0 1287 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 LYPLAL1Q5VWZ2 237 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 TIGD3Q6B0B8 471 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 ALG1LQ6GMV1 187 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 PAQR7Q86WK9 346 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 TBC1D19Q8N5T2 526 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 TRMT61AQ96FX7 289 aaKnown RBP8.83□□□□□ -1
SRSF6-201ENST00000244020 WDFY2Q96P53 400 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 TM9SF2Q99805 663 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 STOX2Q9P2F5 926 aaPredicted RBP8.83□□□□□ -1
SRSF6-201ENST00000244020 SLC35F4A4IF30 521 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 PROM1O43490 865 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 C6orf47O95873 294 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 PRH1P02810 166 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 POLR2CP19387 275 aaPredicted RBP8.83□□□□□ -1
SRSF6-201ENST00000244020 CR2P20023 1033 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 WNT3P56703 355 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 GAB1Q13480 694 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 SSX2Q16385 188 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 FLYWCH1Q4VC44 716 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 MEDAGQ5VYS4 303 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 FAM205BPQ63HN1 556 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 ZFP41Q8N8Y5 198 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 UBTD2Q8WUN7 234 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 SCRN2Q96FV2 425 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 FUZQ9BT04 418 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 ACER3Q9NUN7 267 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 MGAT4AQ9UM21 535 aa8.83□□□□□ -1
SRSF6-201ENST00000244020 A0A0B4J293 547 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 CCL15-CCL14A0A0B4J2E2 113 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 FABP7O15540 132 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 HCN1O60741 890 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 HPGDSO60760 199 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 EPORP19235 508 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 GKP32189 559 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 SPAM1P38567 509 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 PRKAG1P54619 331 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 PPP3R1P63098 170 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 ZNF91Q05481 1191 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 RING1Q06587 406 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 C2orf80Q0P641 193 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 MLLT11Q13015 90 aaPredicted RBP8.82□□□□□ -1
SRSF6-201ENST00000244020 DUSP4Q13115 394 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 CCL15Q16663 113 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 GLYR1Q49A26 553 aaPredicted RBP8.82□□□□□ -1
SRSF6-201ENST00000244020 HECTD3Q5T447 861 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 METTL2BQ6P1Q9 378 aaKnown RBP8.82□□□□□ -1
SRSF6-201ENST00000244020 CXCL17Q6UXB2 119 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 PROKR2Q8NFJ6 384 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 OR52P1PQ8NH57 321 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 RNF31Q96EP0 1072 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 SLITRK2Q9H156 845 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 GKN1Q9NS71 199 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 ZSWIM8A7E2V4 1837 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 LEUTXA8MZ59 168 aa8.82□□□□□ -1
SRSF6-201ENST00000244020 INPPL1O15357 1258 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms