RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 ACTR10Q9NZ32 417 aa13.62□□□□□ -0.23
PRKAB1-201ENST00000229328 TRPC4Q9UBN4 977 aa13.62□□□□□ -0.23
PRKAB1-201ENST00000229328 ENPP4Q9Y6X5 453 aa13.62□□□□□ -0.23
PRKAB1-201ENST00000229328 KNL1Q8NG31 2342 aa13.62□□□□□ -0.23
PRKAB1-201ENST00000229328 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 SLC28A2O43868 658 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 SEMA7AO75326 666 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 NME6O75414 186 aaPredicted RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 TNFP01375 233 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 JUNBP17275 347 aaPredicted RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 ITGA2P17301 1181 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 MATN1P21941 496 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 LSSP48449 732 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 GABARAPL2P60520 117 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 KIAA0895LQ68EN5 471 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 TMEM107Q6UX40 140 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 HMGN2P46Q86SG4 172 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 RBM45Q8IUH3 476 aaKnown RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 SHISA5Q8N114 240 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 SETD9Q8NE22 299 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 SRFBP1Q8NEF9 429 aaKnown RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 OR4D11Q8NGI4 311 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 GPBAR1Q8TDU6 330 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 UTP15Q8TED0 518 aaKnown RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 RLN3Q8WXF3 142 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 TREX2Q9BQ50 279 aaPredicted RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 LHPPQ9H008 270 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 RASSF1Q9NS23 344 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 TMEM74BQ9NUR3 256 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 EVA1BQ9NVM1 165 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 IFNW1P05000 195 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 PVRP15151 417 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 LIMS1P48059 325 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 ARFIP1P53367 373 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 TOP3AQ13472 1001 aaPredicted RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 FRMPD2BQ6IN97 320 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 FIGLAQ6QHK4 219 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 COMTD1Q86VU5 262 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 ZNF761Q86XN6 746 aaPredicted RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 OR13F1Q8NGS4 319 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 ZCCHC10Q8TBK6 192 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 GAL3ST3Q96A11 431 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 C16orf58Q96GQ5 468 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 COL21A1Q96P44 957 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 GABARAPL3Q9BY60 117 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 POLMQ9NP87 494 aaPredicted RBP13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 CPNE7Q9UBL6 633 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 PCDHGA6Q9Y5G7 932 aa13.61□□□□□ -0.23
PRKAB1-201ENST00000229328 LOC105369274A0A096LPK9 316 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 LOC102723532A0A0G2JNH3 316 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 TNFSF14O43557 240 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 COQ9O75208 318 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 GUCY1B2O75343 617 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 VIPP01282 170 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 IGLV3-19P01714 112 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 HMGN2P05204 90 aaKnown RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 CCDC159P0C7I6 412 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 CHRNB1P11230 501 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 TSFMP43897 325 aaKnown RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 MAPK10P53779 464 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 C1orf61Q13536 156 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 LASP1Q14847 261 aaKnown RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 MAD2L1BPQ15013 274 aaPredicted RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 TSPYL5Q86VY4 417 aaPredicted RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 OR4N4Q8N0Y3 316 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 NT5CQ8TCD5 201 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 ZNF566Q969W8 418 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 TM4SF19Q96DZ7 209 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 ZNF681Q96N22 645 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 PITX2Q99697 317 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 APOL4Q9BPW4 351 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 CHCHD3Q9NX63 227 aaKnown RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 BLOC1S6Q9UL45 172 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 ENTPD4Q9Y227 616 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 FAM227AF5H4B4 570 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 GADD45GO95257 159 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 ATE1O95260 518 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 THEGLP0DJG4 465 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 POU2F1P14859 743 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 RHCEP18577 417 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 POU3F3P20264 500 aaPredicted RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 DCKP27707 260 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 RANBP1P43487 201 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 DGKEP52429 567 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 RGS1Q08116 209 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 FUT5Q11128 374 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 FZD2Q14332 565 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 GAS6Q14393 721 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 LTB4RQ15722 352 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 CCDC85BQ15834 202 aaPredicted RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 COL13A1Q5TAT6 717 aaPredicted RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 GTF2IRD2BQ6EKJ0 949 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 GTF2IRD2Q86UP8 949 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 LACC1Q8IV20 430 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 ERI1Q8IV48 349 aaKnown RBP13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 ALDH16A1Q8IZ83 802 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 OR9A2Q8NGT5 310 aa13.6□□□□□ -0.23
PRKAB1-201ENST00000229328 SLC37A2Q8TED4 501 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms