RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 COQ3Q9NZJ6 369 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
SIX4-201ENST00000216513 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 MYH9P35579 1960 aaKnown RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 MYH10P35580 1976 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 SCELO95171 688 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 ANXA2P07355 339 aaKnown RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 CRB2Q5IJ48 1285 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 ARL10Q8N8L6 244 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 RANBP9Q96S59 729 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 SNTG1Q9NSN8 517 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 C5AR2Q9P296 337 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 RFPL3O75679 317 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 ANGPTL1O95841 491 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 XRCC1P18887 633 aaPredicted RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 MNDAP41218 407 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 ASTE1Q2TB18 679 aaPredicted RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 HSPBAP1Q96EW2 488 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 AURKBQ96GD4 344 aaPredicted RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 CITED4Q96RK1 184 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 ELF4Q99607 663 aaPredicted RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 OR51B6Q9H340 312 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 CD93Q9NPY3 652 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 ANKRD36CQ5JPF3 1778 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 EI24O14681 340 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 GPR39O43194 453 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 ZP2Q05996 745 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 NDUFA5Q16718 116 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 RABL3Q5HYI8 236 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 APLFQ8IW19 511 aaPredicted RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 OR5B2Q96R09 309 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 PDE10AQ9Y233 779 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 CSO75390 466 aaKnown RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 THRBP10828 461 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 PIK3CBP42338 1070 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 ZNF613Q6PF04 617 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 WDR53Q7Z5U6 358 aaPredicted RBP13.1□□□□□ -0.31
SIX4-201ENST00000216513 AMER2Q8N7J2 671 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 MCFD2Q8NI22 146 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 CREB3L4Q8TEY5 395 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 OSBPL11Q9BXB4 747 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 PLA2G2FQ9BZM2 168 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 PLEKHM1Q9Y4G2 1056 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 EFCAB9A8MZ26 197 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 IDNKQ5T6J7 187 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 MOAP1Q96BY2 351 aa13.1□□□□□ -0.31
SIX4-201ENST00000216513 BCAS2O75934 225 aaPredicted RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 IGFBP6P24592 240 aaPredicted RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 LEPRP48357 1165 aaKnown RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 GRAMD2AQ8IUY3 354 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 LMNTD1Q8N9Z9 388 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 DENND6BQ8NEG7 585 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 WFDC5Q8TCV5 224 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 C11orf24Q96F05 449 aaPredicted RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 ZNF778Q96MU6 729 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 POLDIP3Q9BY77 421 aaKnown RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 BOKQ9UMX3 212 aaPredicted RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 ERVK-19Q9WJR5 959 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 HS3ST2Q9Y278 367 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 UGT2B7P16662 529 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 DNASE1L3Q13609 305 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 GPR18Q14330 331 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 PTPRRQ15256 657 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 GPR19Q15760 415 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 HYAL4Q2M3T9 481 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 ZNF585AQ6P3V2 769 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 KRTCAP2Q8N6L1 136 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 SLC45A3Q96JT2 553 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 TTYH2Q9BSA4 534 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 POPDC3Q9HBV1 291 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 POMPQ9Y244 141 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 SNX11Q9Y5W9 270 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 ZFAND5O76080 213 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 IFI30P13284 250 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 CD1DP15813 335 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 PCSK2P16519 638 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 IL32P24001 234 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 QPRTQ15274 297 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 FRMD7Q6ZUT3 714 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 ALDH16A1Q8IZ83 802 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 ZNF283Q8N7M2 679 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 THOC3Q96J01 351 aaKnown RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 ZFP3Q96NJ6 502 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 COMMD3Q9UBI1 195 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 CD79AP11912 226 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 TIA1P31483 386 aaKnown RBP eCLIP13.09□□□□□ -0.31
SIX4-201ENST00000216513 CNR2P34972 360 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 RPS9P46781 194 aaKnown RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 CDK9P50750 372 aaKnown RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 DENND5AQ6IQ26 1287 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 GALNT6Q8NCL4 622 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 TMED9Q9BVK6 235 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 OR51I1Q9H343 314 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 DKK3Q9UBP4 350 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 TEX264Q9Y6I9 313 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 HAT1O14929 419 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms