RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Foxn2E9Q7L6 429 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 JunP05627 334 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 NelfeP19426 375 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Htr7P32304 448 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Elk3P41971 409 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Hsd11b2P51661 386 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Bcl2l2P70345 193 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Neurog2P70447 263 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Cyp2j11Q3UNV2 504 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Larp4Q8BWW4 719 aaKnown RBP8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Ces3bQ8VCU1 571 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr866Q8VFI7 312 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Slc40a1Q9JHI9 570 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Dcun1d1Q9QZ73 259 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr1508Q9R0K4 310 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 S1pr3Q9Z0U9 378 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Gm13040A2A8C4 496 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Zfp54E9PW05 585 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Tstd1E9PY03 133 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Zfp995E9Q6M3 437 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Aknad1E9Q8N6 675 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr628K7N6B2 316 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Slc1a3P56564 543 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 FcrlbQ5DRQ8 427 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr328Q5NCD3 310 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Foxb2Q64733 428 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr1350Q8VF34 308 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr123Q8VFQ1 309 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Vsig1Q9D2J4 407 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr934Q9EQ87 310 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Trim10Q9WUH5 489 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 GghQ9Z0L8 317 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Kat6bQ8BRB7 1872 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Cyp2j7A0A140T8U1 504 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 P10404 641 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 HdcP23738 662 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 KhkP97328 298 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 H2-T22Q31615 379 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Gpr19Q61121 415 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Cyp2d40Q6P8N9 338 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Tas2r136Q7TQA8 305 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Btnl9Q8BJE2 536 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Rhbdd3Q8BP97 385 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Q8BPC6 396 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Nipal4Q8BZF2 406 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Stoml1Q8CI66 399 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Cd300eQ8K249 196 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 AdigQ8R400 80 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Gjd3Q91YD1 278 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Prelid3bQ9CYY7 195 aa8.59□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Atp8b3Q6UQ17 1335 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr66F8VQ01 311 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Slc39a2G3X943 309 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr1331K7N684 317 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rpl21O09167 160 aaKnown RBP8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ntsr1O88319 424 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 XlrP05531 208 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Oas1aP11928 367 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 EmbP21995 330 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tgfb2P27090 414 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rab22aP35285 194 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fitm2P59266 262 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Defa20Q45VN2 95 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Cyp2c66Q5GLZ0 490 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Sh3rf1Q69ZI1 892 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr1333Q7TQV7 317 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fam206aQ80ZQ9 193 aaKnown RBP8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 NdnfQ8C119 568 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Alx1Q8C8B0 326 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Vmn1r66Q8K4I0 310 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Degs2Q8R2F2 323 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr1100Q8VFM1 321 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Marc2Q922Q1 338 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Nsa2Q9CR47 260 aaKnown RBP8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Bco1Q9JJS6 566 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Adcy9P51830 1353 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Zfp534A2A7A1 661 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Kifc5bE9PUA5 672 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Zfp983E9PUT0 460 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Zfp988F6VKC7 633 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Vmn2r57L7N269 863 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Pim1P06803 397 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 AhrP30561 848 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Snai1Q02085 264 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Acot10Q32MW3 439 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Zfp987Q32P14 633 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Foxr2Q3UM89 302 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Naa11Q3UX61 218 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Il22ra1Q80XZ4 581 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 SvopQ8BFT9 548 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mief1Q8BGV8 463 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr1265Q8VEZ3 309 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr1276Q8VF40 312 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ndufc2Q9CQ54 120 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm16286Q9CQX6 220 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tmem89Q9DA04 169 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 PycardQ9EPB4 193 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Vmn1r56Q9EPS9 310 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Kifc1Q9QWT9 674 aa8.58□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ptdss2Q9Z1X2 473 aa8.58□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms