RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 OtcP11725 354 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dnajc5P60904 198 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tmem231Q3U284 315 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gtpbp2Q3UJK4 602 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Spag8Q3V0Q6 470 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ctc1Q5SUQ9 1212 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dlx3Q64205 287 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Plekhs1Q8BW88 474 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tmem62Q8BXJ9 643 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Csnka2ipQ8CH19 720 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Leng1Q9DB98 261 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Uba7Q9DBK7 977 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 DpysQ9EQF5 519 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nr4a3Q9QZB6 627 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm30302A0A1Y7VN40 1110 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr913E9Q716 312 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 1700014D04RikJ3QMS2 983 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Bnip3O55003 187 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Il6P08505 211 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gjb1P28230 283 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pck2Q8BH04 640 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr109Q8VG96 314 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Duox1A2AQ92 1551 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1032A2ATE5 310 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Vmn2r94E9PZK8 818 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 UbqlnlQ14DL0 610 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm11992Q5SS90 291 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dusp11Q6NXK5 321 aaKnown RBP11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc46a2Q8CA03 479 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Adgrg2Q8CJ12 1009 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr815Q8VFU0 316 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 ApofQ91V80 315 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Brinp1Q920P3 760 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pus10Q9D3U0 527 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slco1a4Q9EP96 670 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Psmb3Q9R1P1 205 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Espl1P60330 2118 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm3604A0A087WPN2 559 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mtg2A2AFK4 405 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rhox2gL7MUB9 191 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ppt1O88531 306 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dnajb5O89114 348 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rps24P62849 133 aaKnown RBP11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 SbplQ3TUY3 232 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mfsd13aQ6PDE8 519 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Prr5Q812A5 387 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fjx1Q8BQB4 450 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nrip2Q9JHR9 270 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tnfsf13bQ9WU72 309 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pdzd7E9Q9W7 1021 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Glycam1Q02596 151 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Adam30Q811Q3 732 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pou6f2Q8BJI4 691 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nudt7Q99P30 236 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Kndc1Q0KK55 1742 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tp53bp1P70399 1969 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dpysl2O08553 572 aaKnown RBP11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 PurbO35295 324 aaKnown RBP11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Igfbp6P47880 238 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gsc2P56916 198 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 FapP97321 761 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tarbp2P97473 365 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rxfp4Q7TQP4 414 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cdk3Q80YP0 303 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ppp1r8Q8R3G1 351 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 C8gQ8VCG4 202 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr701Q9D3U9 316 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm5519D3Z175 170 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 TmppeD3Z286 447 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tmem104Q3TB48 496 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1364Q5SZS9 314 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 CmahQ61419 577 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cnih3Q6ZWS4 160 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr765Q7TRI6 309 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ppp1r1cQ8BKK4 108 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 CptpQ8BS40 216 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr767Q8VG33 309 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr617Q8VGA1 318 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tram1Q91V04 374 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mageb4A2A9R3 556 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Arl9F7BE40 171 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr270Q7TS19 314 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rhox11Q810N8 206 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 AmtQ8CFA2 403 aaKnown RBP11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Padi6Q8K3V4 682 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr401Q8VFX6 315 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nxnl2Q9D531 156 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tmprss6Q9DBI0 811 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dap3Q9ER88 391 aaKnown RBP11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Adh6bA0A1D5RMB0 384 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Crisp4E9PVG4 293 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Capn5O08688 640 aaKnown RBP11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Steap3Q8CI59 488 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fam69bQ99ML4 431 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nfs1Q9Z1J3 459 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 S1pr1O08530 382 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sp100O35892 482 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cav3P51637 151 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Trappc13Q3TIR1 417 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fbxo31Q3TQF0 507 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms