RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 4930578G10RikQ9D4Q4 153 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rhox2fA2ANE0 191 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm14295A2BG91 834 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm3476K7N6V0 257 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Csf2P01587 141 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hsd17b3P70385 305 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Kbtbd8Q3UQV5 599 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ablim3Q69ZX8 682 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm5416Q6IE28 97 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr1418Q7TQS3 318 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Slitrk5Q810B7 957 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 GanabQ8BHN3 944 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mfsd6Q8CBH5 775 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Il17rdQ8JZL1 738 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Wfikkn1Q8R0S6 552 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ntng1Q8R4G0 539 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Camk1gQ91VB2 477 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cox4i2Q91W29 172 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ankrd54Q91WK7 299 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 TrehQ9JLT2 576 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Plag1Q9QYE0 499 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hspb3Q9QZ57 154 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm29106A0A087WSP8 697 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm5938A2AEN9 163 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 CerklA2AQH1 525 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr59B1ARL3 323 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Fam46aD3Z5S8 447 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm14139F6ZS36 494 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Efna1P52793 205 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Lman2lP59481 347 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ap2m1P84091 435 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm14226Q3TZL0 686 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Xkr5Q5GH66 676 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Prkg2Q61410 762 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Prrg3Q6PAQ9 231 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr845Q7TRG2 312 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 IlvblQ8BU33 632 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 TtpaQ8BWP5 278 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Acat2Q8CAY6 397 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mapre2Q8R001 326 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Foxe1Q8R2I0 371 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Atg13Q91YI1 516 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Oosp1Q925U0 202 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mzt2Q9CQ25 159 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Spg21Q9CQC8 308 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 LhppQ9D7I5 270 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Dnase1l1Q9D7J6 314 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 PrelpQ9JK53 378 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Sema6cQ9WTM3 931 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Eif4hQ9WUK2 248 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Dyrk1bQ9Z188 629 aa9.34□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm29394H3BIW7 199 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Sypl1O09117 261 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 S100a6P14069 89 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Id2P41136 134 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Zic1P46684 447 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Rpl6P47911 296 aaKnown RBP9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Cav3P51637 151 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Lrpap1P55302 360 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Mrps6P58064 125 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Polr2lP62876 67 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Myadml2Q08AU7 307 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Armc5Q5EBP3 926 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 MuskQ61006 868 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gdi2Q61598 445 aaKnown RBP9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Elavl4Q61701 385 aaKnown RBP9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Paqr9Q6TCG2 375 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Clrn3Q8BHH8 226 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfm2Q8BM13 448 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Cdkl1Q8CEQ0 352 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Slc22a22Q8R0S9 554 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Defb35Q8R2I3 63 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr693Q8VF89 316 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Fam3cQ91VU0 227 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Snx4Q91YJ2 450 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Spata19Q9DAQ9 154 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Phc2Q9QWH1 850 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Cfap77A0A087WRI3 283 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Trbv20A0A0B4J1H5 111 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm436B1AVU6 407 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Rhox13F6YCR7 232 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 TertO70372 1122 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Capns1O88456 269 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 JtbO88824 146 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Rc3h2P0C090 1187 aaKnown RBP9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 AboP38649 332 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 PtpaP58389 323 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Crybb2P62696 205 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Anxa4P97429 319 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ctu2Q3U308 514 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ugt2b36Q3UEP4 530 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 OgnQ62000 298 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Tas2r13Q7M720 305 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Slc39a9Q8BFU1 308 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Atp6v1hQ8BVE3 483 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Scara5Q8K299 491 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Sh3glb2Q8R3V5 400 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Akr1d1Q8VCX1 325 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr166Q8VGX2 312 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Mlc1Q8VHK5 382 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 64.2 ms