RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Smyd4Q8BTK5 799 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cstf2tQ8C7E9 632 aaKnown RBP9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Dnajc27Q8CFP6 273 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rasgef1bQ8JZL7 473 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Angptl7Q8R1Q3 337 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 NifkQ91VE6 317 aaKnown RBP9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 GlyatQ91XE0 296 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Fads1Q920L1 447 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 EedQ921E6 441 aaKnown RBP9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 NktrP30415 1453 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Vsig10lD3YZF7 868 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm5724L7N264 670 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 AmbnO55189 407 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cd160O88875 185 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 HmgclP38060 325 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Bpifa1P97361 278 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 BmxP97504 651 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Vmn1r223Q5SSA0 361 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cdh24Q6PFX6 781 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr834Q7TRG8 312 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 FgbQ8K0E8 481 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr109Q8VG96 314 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Plekhj1Q9D240 164 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 A0A286YCD0 109 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Kiaa1522A2A7S8 1013 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ankrd34aB2RW11 495 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Xkr6E9Q6C8 638 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Dhcr7O88455 471 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gng2P63213 71 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 G6pdxQ00612 515 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cln6Q3U466 308 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr381Q5SSP0 311 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ube2j2Q6P073 259 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gpr176Q80WT4 515 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mab21l2Q8BPP1 359 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Txnl4bQ8BUH1 149 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mrgpra5Q91ZC7 304 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Marc2Q922Q1 338 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ly6kQ9CWP4 154 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Map2P20357 1828 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm2022A0A1Y7VLT7 144 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm21904A8HG57 180 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zfp605E9QAH2 694 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm21866J3QMH4 180 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Socs5O54928 536 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Galr2O88854 371 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 DhfrP00375 187 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Polr2cP97760 275 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Q3TTL0 348 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Acvr1bQ61271 505 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Chst2Q80WV3 530 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ncs1Q8BNY6 190 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Scara5Q8K299 491 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zdhhc1Q8R0N9 484 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 D8Ertd738eQ8R1F0 94 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Camk1Q91YS8 374 aa9.45□□□□□ -0.9
Syne1-201ENSMUST00000041639 Col5a2Q3U962 1497 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ms4a4aA0A087WRT7 236 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Prss56F2YMG0 604 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 FaimlJ3QPY3 178 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr1121L7MTT1 314 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cyp27b1O35084 507 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Nthl1O35980 300 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 BckdkO55028 412 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gp6P0C191 313 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Lrrn4clQ3TYX2 239 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 FukQ7TMC8 1090 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr594Q7TRR4 311 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mfsd8Q8BH31 519 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rassf1Q99MK9 340 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Msantd3Q9CR78 275 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 RtcAQ9D7H3 366 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ssna1Q9JJ94 119 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rfx5Q9JL61 658 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ccrl2O35457 360 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Syngr1O55100 234 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ubl4aP21126 157 aaKnown RBP9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tia1P52912 386 aaKnown RBP9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pon3Q62087 354 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Paqr6Q6TCG5 343 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 9130023H24RikQ8BG98 337 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 ClmpQ8R373 373 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Slc22a6Q8VC69 545 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr120Q8VFQ2 330 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Socs7Q8VHQ2 579 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 DenrQ9CQJ6 198 aaKnown RBP9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Nqo2Q9JI75 231 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ahnak2E9PYB0 1738 aaKnown RBP9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Fam43bA2AM80 330 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Vmn1r184E9Q2N4 314 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ech1O35459 327 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ugt2b17P17717 530 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 FauP35545 74 aaKnown RBP9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 StomP54116 284 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Elf3Q3UPW2 391 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Fam71f1Q3UZD7 341 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Arhgef15Q5FWH6 849 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm11992Q5SS90 291 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 Got1l1Q7TSV6 404 aa9.44□□□□□ -0.9
Syne1-201ENSMUST00000041639 DdnQ80TS7 710 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms