RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ufm1P61961 85 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 AtminQ6P9S1 818 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Arf2Q8BSL7 181 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Azin2Q8BVM4 459 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Dctn4Q8CBY8 467 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 LctlQ8K1F9 566 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr686Q8VGX3 317 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gpr37l1Q99JG2 481 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cyp2u1Q9CX98 530 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cyp2j8G3UZ38 503 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gstm3P19639 218 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 GhrhrP32082 423 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cyp2a12P56593 492 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tubg1P83887 451 aaKnown RBP15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cdk2P97377 346 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Npy1rQ04573 382 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Itpripl2Q3UV16 535 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 ZyxQ62523 564 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pwwp2aQ69Z61 730 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Angptl6Q8R0Z6 457 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr516Q8VFZ5 314 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fbxl20Q9CZV8 436 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1306A2BFL7 312 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 5830473C10RikF8VQ07 620 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Obox5G3X9P6 291 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Vmn2r30K7N5W1 852 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Vmn2r47K7N709 852 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ido1P28776 407 aaKnown RBP15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Tas2r3Q7TQA7 316 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Sdhaf2Q8C6I2 164 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 CenpiQ8K1K4 746 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr659Q8VGV6 322 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Oas1hQ8VI97 369 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 IqccA2ADZ8 418 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gm8334F7CD45 553 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Myf6P15375 242 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Tex10Q3URQ0 928 aaKnown RBP15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 FcrlbQ5DRQ8 427 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Slco2b1Q8BXB6 683 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Rnf208Q8K0W3 265 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Traf3ip2Q8N7N6 555 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 CasrQ9QY96 1079 aa15.96■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Mthfd2lD3YZG8 338 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Vmn2r94E9PZK8 818 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Cldn4O35054 210 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 ItgamP05555 1153 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Klrb1bP27812 223 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Klrb1cP27814 223 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 ThpoP40226 356 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Pim3P58750 326 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Slc9a3r1P70441 355 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Vmn1r223Q5SSA0 361 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Epha6Q62413 1035 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr617Q8VGA1 318 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 GlyatQ91XE0 296 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Lmx1aQ9JKU8 382 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 NsdhlQ9R1J0 362 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Mtnd1P03888 318 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Dpf3P58269 378 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Echdc2Q3TLP5 296 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Armc5Q5EBP3 926 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ecm29Q6PDI5 1840 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Slc17a6Q8BLE7 582 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ncs1Q8BNY6 190 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Slc35e2Q8C811 405 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Q8R2K8 148 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Mcoln1Q99J21 580 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Srfbp1Q9CZ91 441 aaKnown RBP15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Cdc42ep5Q9Z0X0 150 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Nup188Q6ZQH8 1759 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gm16432A0A0A6YXX9 775 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Uba1Q02053 1058 aaKnown RBP15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Taf6Q62311 678 aaKnown RBP15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Acy3Q91XE4 318 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Nxnl2Q9D531 156 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Cfap46E9Q2C0 2641 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gm43796A0A0J9YV32 372 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 A0A1L1SV24 88 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Dag1Q62165 893 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Chpt1Q8C025 398 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr401Q8VFX6 315 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 3300002I08RikQ9CXH3 147 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 VasnQ9CZT5 673 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Spdye4cI6XKQ3 339 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ptger3P30557 365 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Cd28P31041 218 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Lmf1Q3U3R4 574 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Etv3Q8R4Z4 513 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr1019Q8VGS3 310 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr103Q920Y8 313 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ttc3O88196 1979 aaKnown RBP15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Hsd3b6O35469 373 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ctla2bP12400 113 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Itln1bQ80ZA0 313 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Piwil4Q8CGT6 848 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Entpd8Q8K0L2 497 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 MypopQ8R4U1 393 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Spred2Q924S7 410 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Cdh17Q9R100 827 aa15.95■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Lrrc72A0A1Y7VMI0 288 aa15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms