RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Vmn2r51L7N215 852 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Sh3yl1O08641 340 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Mtnd1P03888 318 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tm9sf2P58021 662 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 March5Q3KNM2 278 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Inppl1Q6P549 1257 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Kmt5cQ6Q783 468 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr1252Q7TQZ2 314 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Pcdh8Q7TSK3 1070 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Utp15Q8C7V3 528 aaKnown RBP9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Fam155aQ8CCS2 467 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr1387Q8VFA9 311 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr826Q8VFU6 313 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr825Q8VFU7 320 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gorasp1Q91X51 446 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Med8Q9D7W5 268 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Dclk1Q9JLM8 756 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 VapaQ9WV55 249 aaKnown RBP9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tcte1A6H639 498 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sult6b2B7ZWN4 290 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm11397F6V5V4 377 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm6460F6YJZ8 199 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tacr2P30549 384 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Dusp2Q05922 318 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tigd2Q0VBL1 525 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Armc5Q5EBP3 926 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Akt2Q60823 481 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gdi2Q61598 445 aaKnown RBP9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sec24dQ6NXL1 1032 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Slc6a7Q6PGE7 637 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Prickle2Q80Y24 845 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Nceh1Q8BLF1 408 aaKnown RBP9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Vmn1r18Q8R2C8 299 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Memo1Q91VH6 297 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gtf2e2Q9D902 292 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tm9sf3Q9ET30 587 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Zfp978A2A7I1 335 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Mgat4eA6H684 439 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Phf11bB4XVQ1 276 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 SelenonD3Z2R5 557 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm10608E9PZ13 166 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm6803J3QPI8 144 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Adamts15P59384 950 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Krtcap2Q5RL79 136 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Laptm5Q61168 261 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Il10raQ61727 575 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Smarcd3Q6P9Z1 483 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr1051Q7TR76 308 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Otop2Q80SX5 563 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Klhl24Q8BRG6 600 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Mterf1aQ8CHZ9 379 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Q8K039 155 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Vmn1r84Q8R284 318 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rnf130Q8VEM1 419 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr1278Q8VF39 313 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cwh43Q91YL7 699 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tmed9Q99KF1 235 aaKnown RBP9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 9530002B09RikQ9EPV7 135 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Plscr1Q9JJ00 328 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Clec1bQ9JL99 229 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Slc7a9Q9QXA6 487 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pcdhgb8A0A140LI48 931 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Zfp981A2A8V7 445 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 ChadlE9Q7T7 748 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr6P34986 316 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Drd4P51436 387 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rps13P62301 151 aaKnown RBP9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rab33aP97950 237 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Nt5eQ61503 576 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Phf11aQ8BVM9 293 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Fmo9Q8C116 539 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Yipf4Q8C407 246 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Defb36Q8K3U4 67 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Dhcr24Q8VCH6 516 aaKnown RBP9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Acer3Q9D099 267 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Lman2Q9DBH5 358 aaKnown RBP9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 TescQ9JKL5 214 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 ClcnkbQ9WUB6 687 aa9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Zswim8Q3UHH1 1832 aaKnown RBP9.52□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Polr2aP08775 1970 aaKnown RBP9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Usp51B1AY15 661 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Lrr1D3YY91 422 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Vmn2r22E9Q7S8 853 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Brd7O88665 651 aaKnown RBP9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 DgkaO88673 730 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Klrg1O88713 188 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gja1P23242 382 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 ThP24529 498 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Camk2bP28652 542 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Alox12eP55249 662 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 PrkcgP63318 697 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cntn5P68500 1098 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Dcdc2Q5DU00 475 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Zfp658Q5PPQ4 887 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sox17Q61473 419 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Runx3Q64131 409 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Znf182Q6P560 627 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Uhrf2Q7TMI3 803 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gemin8Q8BHE1 238 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cadm2Q8BLQ9 435 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms