RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ICAM3P32942 547 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 CLDN20P56880 219 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 RBBP4Q09028 425 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 C1orf220Q5T0J3 134 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 BCL2L15Q5TBC7 163 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF852Q6ZMS4 543 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 OR9I1Q8NGQ6 314 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 MFSD8Q8NHS3 518 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 GRIN3AQ8TCU5 1115 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 CD300LFQ8TDQ1 290 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 PCED1BQ96HM7 432 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 SEC22CQ9BRL7 303 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 MMP28Q9H239 520 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 LRTM1Q9HBL6 345 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 MCCC2Q9HCC0 563 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 KLHL9Q9P2J3 617 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 FZD10Q9ULW2 581 aa7.94□□□□□ -1.14
NECAP1-227ENST00000640648 MED1Q15648 1581 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 NRXN3Q9Y4C0 1643 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SMLR1H3BR10 107 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SDHDO14521 159 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ABCD4O14678 606 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PTP4A3O75365 173 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 EFNA1P20827 205 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SCNN1AP37088 669 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 MLLT1Q03111 559 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF33AQ06730 810 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PPP1R8Q12972 351 aaKnown RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 MAD2L1BPQ15013 274 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 NCBP2-AS2Q69YL0 99 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SLC36A4Q6YBV0 504 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ENTHD1Q8IYW4 607 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 GPC2Q8N158 579 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ARMC10Q8N2F6 343 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 Q8N9G6 341 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 OR10K1Q8NGX5 313 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ZFP3Q96NJ6 502 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 FZD8Q9H461 694 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 DPEP2Q9H4A9 486 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ZDHHC2Q9UIJ5 367 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 AGO1Q9UL18 857 aaKnown RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 TRAV6A0A075B6T7 132 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 CIB4A0PJX0 185 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 TMEM210A6NLX4 147 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 TREHO43280 583 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 RBBP9O75884 186 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SIX3O95343 332 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 IGSF6O95976 241 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 URODP06132 367 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 GABRB3P28472 473 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 MAP2K4P45985 399 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 RBP2P50120 134 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 TAS2R31P59538 309 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 CREB5Q02930 508 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 CRYZQ08257 329 aaKnown RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SIX1Q15475 284 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF674Q2M3X9 581 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 OVCH2Q7RTZ1 564 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 RDH10Q8IZV5 341 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF565Q8N9K5 539 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PIWIL1Q96J94 861 aaKnown RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ABRACLQ9P1F3 81 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SLIT2O94813 1529 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 IQCF5A8MTL0 148 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 OR4F21O95013 312 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ALPLP05186 524 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PRKAG1P54619 331 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 EPHB3P54753 998 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ACTBP60709 375 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PKIAP61925 76 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ACTG1P63261 375 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 MRPS6P82932 125 aaKnown RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 TGM3Q08188 693 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PPP1R3AQ16821 1122 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ARHGAP40Q5TG30 622 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 RPL22L1Q6P5R6 122 aaKnown RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ULK3Q6PHR2 472 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ANKRD46Q86W74 232 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 GID4Q8IVV7 300 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 NAT16Q8N8M0 369 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PCSK9Q8NBP7 692 aaKnown RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 OR52N1Q8NH53 320 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SPPL2BQ8TCT7 592 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PMM1Q92871 262 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SCMH1Q96GD3 660 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PPP1R16AQ96I34 528 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SIGLEC10Q96LC7 697 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 APOLD1Q96LR9 279 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ZDHHC6Q9H6R6 413 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 PLCXD1Q9NUJ7 323 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 POMT1Q9Y6A1 747 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 MYH3P11055 1940 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ARFGEF2Q9Y6D5 1785 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 A0A0A6YYH2 397 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 GXYLT2A0PJZ3 443 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 A6NJ64 397 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 NPIPA7E9PJI5 369 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 ACOT8O14734 319 aa7.93□□□□□ -1.14
NECAP1-227ENST00000640648 CASC3O15234 703 aaKnown RBP7.93□□□□□ -1.14
NECAP1-227ENST00000640648 SCGNO76038 276 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms