RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NKX3-2P78367 333 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCDH1Q08174 1060 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 KEAP1Q14145 624 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PTGES3Q15185 160 aaKnown RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 C11orf91Q3C1V1 193 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ASTLQ6HA08 431 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM131AQ6UXB0 335 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC22A16Q86VW1 577 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PTOV1Q86YD1 416 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ANKRD13BQ86YJ7 626 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM20CQ8IXL6 584 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RIMKLAQ8IXN7 391 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR56A3Q8NH54 315 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPR151Q8TDV0 419 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ADAMTS16Q8TE57 1224 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RFKQ969G6 155 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RHNO1Q9BSD3 238 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 YIPF2Q9BWQ6 316 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 BRF2Q9HAW0 419 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 DMRT3Q9NQL9 472 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RWDD3Q9Y3V2 267 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCL27Q9Y4X3 112 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR1A2Q9Y585 309 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PIKFYVEQ9Y2I7 2098 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 IGLV3-16A0A075B6K0 115 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 C17orf113A0A1B0GUU1 675 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PPM1DO15297 605 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 HLA-DPB1P04440 258 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 NT5EP21589 574 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ITGB7P26010 798 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCGF2P35227 344 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GGT2P36268 569 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RGS6P49758 472 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 DCDC1P59894 354 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SIM1P81133 766 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 STX4Q12846 297 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RPA4Q13156 261 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RUNX3Q13761 415 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNHIT3Q15649 155 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ITPRIPL2Q3MIP1 535 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCDC92Q53HC0 331 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 DDI2Q5TDH0 399 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ENPP7Q6UWV6 458 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 VN1R5Q7Z5H4 357 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 IQCHQ86VS3 1027 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 KLHDC8AQ8IYD2 350 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 METTL4Q8N3J2 472 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 KCT2Q8NC54 265 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SPPL3Q8TCT6 385 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 LIPT1Q9Y234 373 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 COLEC10Q9Y6Z7 277 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PIEZO2Q9H5I5 2752 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SMIM30A4D0T7 59 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 M0R3H8 397 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 AKAP8O43823 692 aaKnown RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 C1orf105O95561 183 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 IFNA16P05015 189 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CA3P07451 260 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRG2P13727 222 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CA5AP35218 305 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC14A1Q13336 389 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ARHGAP19Q14CB8 494 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPR68Q15743 365 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SYPL1Q16563 259 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 KLHL22Q53GT1 634 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF776Q68DI1 518 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SP5Q6BEB4 398 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 USP43Q70EL4 1123 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMEM179BQ7Z7N9 219 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 LHFPL3Q86UP9 236 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TRIM73Q86UV7 250 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RAB43Q86YS6 212 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 LINC00471Q8N535 108 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 WDR48Q8TAF3 677 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF671Q8TAW3 534 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 AP3S1Q92572 193 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PDXPQ96GD0 296 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CRELD1Q96HD1 420 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR4K3Q96R72 315 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 MACROD1Q9BQ69 325 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SPATA9Q9BWV2 254 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 BHLHE41Q9C0J9 482 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 MARCH7Q9H992 704 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMEM165Q9HC07 324 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 C1GALT1Q9NS00 363 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CUEDC1Q9NWM3 386 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPR34Q9UPC5 381 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNFX1Q9P2E3 1918 aaKnown RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 FABP12A6NFH5 140 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CD22P20273 847 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CD72P21854 359 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 RPL4P36578 427 aaKnown RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 MAGEA2P43356 314 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 MAGEA10P43363 369 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF91Q05481 1191 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 FCHO2Q0JRZ9 810 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 COX10Q12887 443 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ADPRMQ3LIE5 342 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 HENMT1Q5T8I9 393 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms