RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SSR2P43308 183 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 LIMS1P48059 325 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 RAB8AP61006 207 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 REEP5Q00765 189 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 TIGD6Q17RP2 521 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 PARM1Q6UWI2 310 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 ARMC8Q8IUR7 673 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 IQCF1Q8N6M8 205 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 B3GNT7Q8NFL0 401 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR2A1Q8NGT9 310 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 SMPDL3AQ92484 453 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 POP5Q969H6 163 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 PDXPQ96GD0 296 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF347Q96SE7 839 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 RHBGQ9H310 441 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 MVB12BQ9H7P6 319 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 FBXW2Q9UKT8 454 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 MAPRE3Q9UPY8 281 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 POFUT2Q9Y2G5 429 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 BRWD1Q9NSI6 2320 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 SLC28A2O43868 658 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 MFN2O95140 757 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 DBTP11182 482 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 CBLP22681 906 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 GDI1P31150 447 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 CCT3P49368 545 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 DNASE1L3Q13609 305 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 C1QTNF12Q5T7M4 302 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 NDUFAF5Q5TEU4 345 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 TCTN3Q6NUS6 607 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 RTL10Q7L3V2 364 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 DSG4Q86SJ6 1040 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 TMEM145Q8NBT3 493 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR14C36Q8NHC7 312 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 APOBEC4Q8WW27 367 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 NEURL3Q96EH8 262 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 TRMT61BQ9BVS5 477 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 GLIPR2Q9H4G4 154 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 AKIP1Q9NQ31 210 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 ERGIC3Q9Y282 383 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 HCN4Q9Y3Q4 1203 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 KCNE3Q9Y6H6 103 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 CLCA1A8K7I4 914 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 CLDN25C9JDP6 229 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 HAT1O14929 419 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 FRS3O43559 492 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 SULT1C4O75897 302 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 CDK1P06493 297 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 ADORA3P0DMS8 318 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 ANXA8P13928 327 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 GPC1P35052 558 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 INAQ16352 499 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 C18orf63Q68DL7 685 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 NUDT13Q86X67 352 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 RBM12BQ8IXT5 1001 aaKnown RBP13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 SVOPQ8N4V2 548 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 CAMK1GQ96NX5 476 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 MYADMQ96S97 322 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 ITPAQ9BY32 194 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 PBX4Q9BYU1 374 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR51I1Q9H343 314 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF556Q9HAH1 456 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 WASH6PQ9NQA3 447 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 AHSPQ9NZD4 102 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 SPATA7Q9P0W8 599 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 DENND4AQ7Z401 1863 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 H0Y8X5 98 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 SLC22A1O15245 554 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 RPL3P39023 403 aaKnown RBP13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 CLK1P49759 484 aaKnown RBP13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 CLDN2P57739 230 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 KRT33BQ14525 404 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 HEPACAMQ14CZ8 416 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 IKBIPQ70UQ0 350 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 RD3Q7Z3Z2 195 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 CCDC116Q8IYX3 515 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 MFSD4AQ8N468 514 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 STX19Q8N4C7 294 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR52E1Q8NGJ3 308 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF675Q8TD23 568 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 CREB3L4Q8TEY5 395 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR5P2Q8WZ92 322 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 MTERF3Q96E29 417 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZHX1-C8orf76Q96EF9 292 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 C16orf58Q96GQ5 468 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 COX4I2Q96KJ9 171 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 CENPOQ9BU64 300 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 TEX101Q9BY14 249 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 SLIRPQ9GZT3 109 aaKnown RBP13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 MIR1-1HGQ9H1L0 117 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 DCSTAMPQ9H295 470 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 SLC6A20Q9NP91 592 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 EQTNQ9NQ60 294 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 DNAJC27Q9NZQ0 273 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 ICKQ9UPZ9 632 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 ATG4BQ9Y4P1 393 aa13.34□□□□□ -0.27
PCDHGA3-202ENST00000612467 LAMA1P25391 3075 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms