RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 STK38LQ9Y2H1 464 aa10.73□□□□□ -0.69
VMP1-211ENST00000591315 PCDHA9Q9Y5H5 950 aa10.73□□□□□ -0.69
VMP1-211ENST00000591315 CLCA3PQ9Y6N3 262 aa10.73□□□□□ -0.69
VMP1-211ENST00000591315 GABRR3A8MPY1 467 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 PCDH7O60245 1069 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 NPHS1O60500 1241 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 KLHL41O60662 606 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 WISP2O76076 250 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 CLPSP04118 112 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 IL3P08700 152 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 CT62P0C5K7 136 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 LINC00032P0C843 101 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 DHRS4L1P0CG22 281 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 UROSP10746 265 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 ALOX15P16050 662 aaPredicted RBP10.72□□□□□ -0.69
VMP1-211ENST00000591315 ALDH9A1P49189 494 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 WDR4P57081 412 aaKnown RBP10.72□□□□□ -0.69
VMP1-211ENST00000591315 MLF1P58340 268 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 TAS2R50P59544 299 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 FOXK1P85037 733 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 PMP22Q01453 160 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 ACSM2AQ08AH3 577 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 TUBA3CQ13748 450 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 SERTAD2Q14140 314 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 ZNF267Q14586 743 aaPredicted RBP10.72□□□□□ -0.69
VMP1-211ENST00000591315 ZNF169Q14929 603 aaPredicted RBP10.72□□□□□ -0.69
VMP1-211ENST00000591315 UGT3A2Q3SY77 523 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 SPDYAQ5MJ70 313 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 KANK2Q63ZY3 851 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 ACSM2BQ68CK6 577 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 OR52E8Q6IFG1 317 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 TUBA3EQ6PEY2 450 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 Q6ZSR9 355 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 PAGE2Q7Z2X7 111 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 TRIM46Q7Z4K8 759 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 HPS6Q86YV9 775 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 NUDCD3Q8IVD9 361 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 TMEM132CQ8N3T6 1108 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 GBP7Q8N8V2 638 aaPredicted RBP10.72□□□□□ -0.69
VMP1-211ENST00000591315 ANKRD42Q8N9B4 389 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 OR14A16Q8NHC5 309 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 ZNF721Q8TF20 911 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 C16orf78Q8WTQ4 265 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 TM9SF4Q92544 642 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 HAS2Q92819 552 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 MIB2Q96AX9 1013 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 VMP1Q96GC9 406 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 SENP5Q96HI0 755 aaPredicted RBP10.72□□□□□ -0.69
VMP1-211ENST00000591315 ZNF354BQ96LW1 612 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 DGAT2Q96PD7 388 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 C20orf27Q9GZN8 174 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.72□□□□□ -0.69
VMP1-211ENST00000591315 TMBIM4Q9HC24 238 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 SENP1Q9P0U3 644 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 MAP10Q9P2G4 905 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 ZDHHC2Q9UIJ5 367 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 DLGAP4Q9Y2H0 992 aa10.72□□□□□ -0.69
VMP1-211ENST00000591315 POLR3HQ9Y535 204 aaPredicted RBP10.72□□□□□ -0.69
VMP1-211ENST00000591315 SERTM1A2A2V5 107 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 DYTNA2CJ06 578 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 OR5H15A6NDH6 313 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 WWP2O00308 870 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 NME6O75414 186 aaPredicted RBP10.71□□□□□ -0.69
VMP1-211ENST00000591315 MYZAPP0CAP1 466 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 BGNP21810 368 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 TACR1P25103 407 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 TIA1P31483 386 aaKnown RBP eCLIP10.71□□□□□ -0.69
VMP1-211ENST00000591315 SOX18P35713 384 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 FEN1P39748 380 aaKnown RBP10.71□□□□□ -0.69
VMP1-211ENST00000591315 UQCRFS1P47985 274 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 CLCN2P51788 898 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 XKP51811 444 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 MAGOHP61326 146 aaKnown RBP10.71□□□□□ -0.69
VMP1-211ENST00000591315 ERVK-8P63133 956 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 TLR1Q15399 786 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 TERF2Q15554 542 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 CHI3L2Q15782 390 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 MEP1AQ16819 746 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 IMPG1Q17R60 797 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 SPINK14Q6IE38 97 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 FAM111BQ6SJ93 734 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 SLC5A8Q8N695 610 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 MORN4Q8NDC4 146 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 MDS2Q8NDY4 140 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 SIMC1Q8NDZ2 872 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 CDC26Q8NHZ8 85 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 MGARPQ8TDB4 240 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 DAZLQ92904 295 aaKnown RBP10.71□□□□□ -0.69
VMP1-211ENST00000591315 TLCD1Q96CP7 247 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 CNRIP1Q96F85 164 aaPredicted RBP10.71□□□□□ -0.69
VMP1-211ENST00000591315 C3orf30Q96M34 536 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 TAAR6Q96RI8 345 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 CNPPD1Q9BV87 410 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 WDR41Q9HAD4 459 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 SSU72Q9NP77 194 aaKnown RBP10.71□□□□□ -0.69
VMP1-211ENST00000591315 KLHL1Q9NR64 748 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 NMRK1Q9NWW6 199 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 MCM8Q9UJA3 840 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 EXO1Q9UQ84 846 aaKnown RBP10.71□□□□□ -0.69
VMP1-211ENST00000591315 ERVK-19Q9WJR5 959 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms