RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SLC29A3Q9BZD2 475 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 FRRS1LQ9P0K9 344 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 VTI1BQ9UEU0 232 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 TRPS1Q9UHF7 1281 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 DCDC2Q9UHG0 476 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 VPS4AQ9UN37 437 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 ATG4BQ9Y4P1 393 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 ASB4Q9Y574 426 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 COPG1Q9Y678 874 aaKnown RBP10.45□□□□□ -0.74
SMAD4-211ENST00000590499 UTP20O75691 2785 aaKnown RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 ICE1Q9Y2F5 2266 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 DIDO1Q9BTC0 2240 aaKnown RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 GABRR3A8MPY1 467 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 G3V2L1 256 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 PROM1O43490 865 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 FGF17O60258 216 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 PRAMEF2O60811 474 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 LDB3O75112 727 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 CDH16O75309 829 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 GLRA3O75311 464 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 CBX6O95503 412 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 UQCRHP07919 91 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 NUDT17P0C025 328 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 IMPDH1P20839 514 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 CPN2P22792 545 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 ARL1P40616 181 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 MLF1P58340 268 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 TAS2R50P59544 299 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 TNFRSF17Q02223 184 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 MRPL49Q13405 166 aaKnown RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 TUBA3CQ13748 450 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 C18orf63Q68DL7 685 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 ZNF324BQ6AW86 544 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 TUBA3EQ6PEY2 450 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 GPR180Q86V85 440 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 RPS19BP1Q86WX3 136 aaKnown RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 SLC22A9Q8IVM8 553 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 GRHL3Q8TE85 626 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 TRPC4APQ8TEL6 797 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 PTPMT1Q8WUK0 201 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 VMP1Q96GC9 406 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 SLX1AQ9BQ83 275 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 ALOXE3Q9BYJ1 711 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 PNO1Q9NRX1 252 aaKnown RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 FARSBQ9NSD9 589 aaKnown RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 LYARQ9NX58 379 aaKnown RBP10.44□□□□□ -0.74
SMAD4-211ENST00000590499 MS4A12Q9NXJ0 267 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 PHF11Q9UIL8 331 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 FBXW2Q9UKT8 454 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 PCDHGB6Q9Y5F9 930 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 SPACA6W5XKT8 324 aa10.44□□□□□ -0.74
SMAD4-211ENST00000590499 NBPF19A0A087WUL8 3843 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 TRBV11-1A0A0K0K1C0 115 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 A0A1W2PR48 441 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 TMEM200CA6NKL6 621 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 SMIM23A6NLE4 172 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 PRKNO60260 465 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 PLIN3O60664 434 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 PRKRAO75569 313 aaKnown RBP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 NEURL1O76050 574 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 SUPT7LO94864 414 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 OR4F21O95013 312 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 DDAH2O95865 285 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 KRT15P19012 456 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 TPP2P29144 1249 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 TRHRP34981 398 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 CRHR1P34998 444 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 CD96P40200 585 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 CLCN2P51788 898 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 ID2Q02363 134 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 PLAURQ03405 335 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 SLC18A2Q05940 514 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 LCP2Q13094 533 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 IFT88Q13099 833 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 SERTAD2Q14140 314 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 EMBQ6PCB8 327 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 ZYG11AQ6WRX3 759 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 ZNF227Q86WZ6 799 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 NUDT13Q86X67 352 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 METTL4Q8N3J2 472 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 TMEM132CQ8N3T6 1108 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 OR2W6PQ8NHA6 318 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 FAR1Q8WVX9 515 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 CAVIN3Q969G5 261 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 NCLNQ969V3 563 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 MTFMTQ96DP5 389 aaKnown RBP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 SCMH1Q96GD3 660 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 SIGLEC12Q96PQ1 595 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 MRPL1Q9BYD6 325 aaKnown RBP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 GSTO2Q9H4Y5 243 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 ELOVL6Q9H5J4 265 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 CDCP1Q9H5V8 836 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 RPF2Q9H7B2 306 aaKnown RBP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 TRIM45Q9H8W5 580 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-211ENST00000590499 BRF2Q9HAW0 419 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 ADAM29Q9UKF5 820 aa10.43□□□□□ -0.74
SMAD4-211ENST00000590499 MYOCOSA0A1B0GUC4 107 aa10.42□□□□□ -0.74
SMAD4-211ENST00000590499 MANBAO00462 879 aa10.42□□□□□ -0.74
SMAD4-211ENST00000590499 MLYCDO95822 493 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms