RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 F2RL3Q96RI0 385 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 PRMT1Q99873 361 aaKnown RBP3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 RBM4Q9BWF3 364 aaKnown RBP3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 TMEM245Q9H330 911 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 DPEP2Q9H4A9 486 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 ZDHHC6Q9H6R6 413 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 TDRD3Q9H7E2 651 aaKnown RBP3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 MARCH7Q9H992 704 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 HYPKQ9NX55 129 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 CWC25Q9NXE8 425 aaPredicted RBP3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 DBF4Q9UBU7 674 aaPredicted RBP3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 TSPAN16Q9UKR8 245 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 FOXA2Q9Y261 457 aaPredicted RBP3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 ZNF510Q9Y2H8 683 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 WDR37Q9Y2I8 494 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 ACACBO00763 2458 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 MAST2Q6P0Q8 1798 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 LAMA5O15230 3695 aa3.2□□□□□ -1.9
PPP4R1-229ENST00000584754 UMODL1Q5DID0 1318 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 FAM205AQ6ZU69 1335 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 ATRXP46100 2492 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 RLFQ13129 1914 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SMCHD1A6NHR9 2005 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 EP300Q09472 2414 aaPredicted RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 BAHCC1Q9P281 2608 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 A0A087X0K7 114 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 TMEM129A0AVI4 362 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 E5RGE8 158 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 TRMUO75648 421 aaKnown RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 CEACAM4O75871 244 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 NADKO95544 446 aaPredicted RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 OLFM2O95897 454 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 IGKV5-2P06315 115 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 HOXB7P09629 217 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 OR3A1P47881 315 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 NUMBP49757 651 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SERPINH1P50454 418 aaKnown RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 CLCN4P51793 760 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 RIPK4P57078 832 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 FKBP1AP62942 108 aaKnown RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 AP1B1Q10567 949 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SQLEQ14534 574 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SGCBQ16585 318 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SLC39A12Q504Y0 691 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 C14orf177Q52M58 125 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 ZNF542PQ5EBM4 170 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 ATP1A1-AS1Q5TC04 95 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 C1orf189Q5VU69 101 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 PM20D1Q6GTS8 502 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 ZNF770Q6IQ21 691 aaPredicted RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SLC27A4Q6P1M0 643 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 ALKBH5Q6P6C2 394 aaKnown RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SLC25A47Q6Q0C1 308 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 TMEM207Q6UWW9 146 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 B3GLCTQ6Y288 498 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 RFPL4BQ6ZWI9 263 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 CYP4V2Q6ZWL3 525 aaPredicted RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 APLFQ8IW19 511 aaPredicted RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 APCDD1Q8J025 514 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 KLHDC1Q8N7A1 406 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 ARL10Q8N8L6 244 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 NAT8LQ8N9F0 302 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 TMEM178AQ8NBL3 297 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 OR2T11Q8NH01 316 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 OR4C3Q8NH37 302 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 OR6S1Q8NH40 331 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 FAM76AQ8TAV0 307 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 MGARPQ8TDB4 240 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 HCAR2Q8TDS4 363 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 APOBEC4Q8WW27 367 aaKnown RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 TMEM190Q8WZ59 177 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 GGHQ92820 318 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 CASP10Q92851 521 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 ZNF501Q96CX3 271 aaPredicted RBP3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 LGALS12Q96DT0 336 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 OMA1Q96E52 524 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 ASCL2Q99929 193 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 CCM2Q9BSQ5 444 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SPXQ9BT56 116 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 HOXD1Q9GZZ0 328 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 THAP2Q9H0W7 228 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 C11orf49Q9H6J7 331 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 SLC52A3Q9NQ40 469 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 PNPLA3Q9NST1 481 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 HACD3Q9P035 362 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 EPHA6Q9UF33 1036 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 APPL1Q9UKG1 709 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 NCKAP1Q9Y2A7 1128 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 NSG2Q9Y328 171 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 PCDHGA1Q9Y5H4 931 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 CACNA1FO60840 1977 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 PKD1L2Q7Z442 2459 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 MYH13Q9UKX3 1938 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 MAPK8IP3Q9UPT6 1336 aa3.19□□□□□ -1.9
PPP4R1-229ENST00000584754 PLXNA1Q9UIW2 1896 aa3.18□□□□□ -1.9
PPP4R1-229ENST00000584754 FASNP49327 2511 aaKnown RBP3.18□□□□□ -1.9
PPP4R1-229ENST00000584754 CEP250Q9BV73 2442 aa3.18□□□□□ -1.9
PPP4R1-229ENST00000584754 MYO7AQ13402 2215 aa3.18□□□□□ -1.9
PPP4R1-229ENST00000584754 RNF103-CHMP3A0A140T963 221 aa3.18□□□□□ -1.9
PPP4R1-229ENST00000584754 hCG_38984A0A1B0GV85 526 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms