RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 A6NNC1 897 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 CCDC188H7C350 402 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 SYT5O00445 386 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 TAPBPO15533 448 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 CDH16O75309 829 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 ETHE1O95571 254 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 CELA3AP09093 270 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 DRD2P14416 443 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 IVDP26440 423 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 GDF1P27539 372 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 ADH7P40394 386 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 CASP2P42575 452 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 PAFAH1B1P43034 410 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 IGLV3-21P80748 117 aaPredicted RBP13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 TNFRSF17Q02223 184 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 ID2Q02363 134 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 SLAMF1Q13291 335 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 CEBPEQ15744 281 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 PRAMEF20Q5VT98 475 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 KHDRBS2Q5VWX1 349 aaKnown RBP13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 HLA-DQA1Q5Y7H0 255 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 OR4C11Q6IEV9 310 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 GPR180Q86V85 440 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 ZBED8Q8IZ13 594 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 ZNF321PQ8N8H1 164 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 PYROXD1Q8WU10 500 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 EXT2Q93063 718 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 ANKRD9Q96BM1 317 aaPredicted RBP13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 DTNBP1Q96EV8 351 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 CPNE1Q99829 537 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 SNX15Q9NRS6 342 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 LYARQ9NX58 379 aaKnown RBP13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 PTBP2Q9UKA9 531 aaKnown RBP13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 HCFC1P51610 2035 aa13.08□□□□□ -0.31
SMARCD2-205ENST00000577686 PHF3Q92576 2039 aaKnown RBP13.08□□□□□ -0.31
SMARCD2-205ENST00000577686 EFCAB8A8MWE9 144 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 E7ESA3 106 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 K7EPI3 171 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 FGF17O60258 216 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 SNX4O95219 450 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 TGFB1P01137 390 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 IGKV3-11P04433 115 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 FBXO45P0C2W1 286 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 CD1DP15813 335 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 EPB42P16452 691 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 BMP5P22003 454 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 GP5P40197 560 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 MASP1P48740 699 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 DLX5P56178 289 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 NRG3P56975 720 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 CALCOCO2Q13137 446 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 FBXL19-AS1Q494R0 122 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 ZNF793Q6ZN11 406 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 RAPH1Q70E73 1250 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 TBC1D1Q86TI0 1168 aaPredicted RBP13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 LIX1LQ8IVB5 337 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 C9orf40Q8IXQ3 194 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 LAS2Q8IYD9 372 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 NRGNQ92686 78 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 PWWP2AQ96N64 755 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 GPR22Q99680 433 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 NMRAL1Q9HBL8 299 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 SPRR3Q9UBC9 169 aa13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 ZNF629Q9UEG4 869 aaPredicted RBP13.08□□□□□ -0.32
SMARCD2-205ENST00000577686 ANKRD33BA6NCL7 494 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 SYCE1LA8MT33 242 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 SUPT3HB4E1H0 165 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 RTCAO00442 366 aaKnown RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 EIF3HO15372 352 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 PHGDHO43175 533 aaKnown RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 SUPT3HO75486 399 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 EPPINO95925 133 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 TBX6O95947 436 aaPredicted RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 KRT15P19012 456 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 GALNSP34059 522 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 SPRP35270 261 aaPredicted RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 TIMP3P35625 211 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 PIK3CBP42338 1070 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 NR0B1P51843 470 aaKnown RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 RAB10P61026 200 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 HERVK_113P63132 956 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 ERVK-8P63133 956 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 DDX39BQ13838 428 aaKnown RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 ZNF267Q14586 743 aaPredicted RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 RPS6KA2Q15349 733 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 ACSF3Q4G176 576 aaPredicted RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 DEPDC1Q5TB30 811 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 ADNP2Q6IQ32 1131 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 GRHL2Q6ISB3 625 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 CYP20A1Q6UW02 462 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 SCIMPQ6UWF3 145 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 CAPN12Q6ZSI9 719 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 UBE3DQ7Z6J8 389 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 PACS2Q86VP3 889 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 OR7G3Q8NG95 312 aa13.07□□□□□ -0.32
SMARCD2-205ENST00000577686 DIO2Q92813 273 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms