RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TIPARPQ7Z3E1 657 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 MTDHQ86UE4 582 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 SAMD14Q8IZD0 417 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 CACNA2D3Q8IZS8 1091 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 DTWD1Q8N5C7 304 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 ESX1Q8N693 406 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 OR5T3Q8NGG3 340 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 TEX37Q96LM6 180 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 LRRC37BQ96QE4 947 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PRPF18Q99633 342 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 C1orf50Q9BV19 199 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 EBPLQ9BY08 206 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 SLC7A5P2Q9GIP4 190 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 NMUR2Q9GZQ4 415 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 RPF2Q9H7B2 306 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 LANCL2Q9NS86 450 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 TEX10Q9NXF1 929 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 FOXJ2Q9P0K8 574 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 ZNF282Q9UDV7 671 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PSME2Q9UL46 239 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 MMACHCQ9Y4U1 282 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 CLDN16Q9Y5I7 305 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 SPACA6W5XKT8 324 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 ABCA2Q9BZC7 2435 aa10.47□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PDZD2O15018 2839 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 FAM234BA2RU67 622 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PSMD12O00232 456 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 FCHO1O14526 889 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PCDH17O14917 1159 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 SCAMP2O15127 329 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PGRMC2O15173 223 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 AIFM1O95831 613 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 RECKO95980 971 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 FHP07954 510 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 IL3P08700 152 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 CCNYL3P0C7X3 344 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 FBLP22087 321 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 CPN2P22792 545 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 GRNP28799 593 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 IL12AP29459 219 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 RBMS1P29558 406 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PRDX6P30041 224 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PPP2R1BP30154 601 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 GALNSP34059 522 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 HNRNPFP52597 415 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 STX1BP61266 288 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 UFM1P61960 85 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 LRRC74AQ0VAA2 488 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 KLF10Q13118 480 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 RCAN2Q14206 197 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 NKG7Q16617 165 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 TBR1Q16650 682 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 UGT8Q16880 541 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 C18orf63Q68DL7 685 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 ZNF787Q6DD87 383 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 LCN10Q6JVE6 187 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 C6orf89Q6UWU4 347 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 QSOX2Q6ZRP7 698 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 MSANTD1Q6ZTZ1 278 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 SCUBE1Q8IWY4 988 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 FITM2Q8N6M3 262 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 MIB2Q96AX9 1013 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 ANKRD9Q96BM1 317 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 ZNF681Q96N22 645 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 CATSPER2Q96P56 530 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 TSSK3Q96PN8 268 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 GPR87Q9BY21 358 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 DPY30Q9C005 99 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 BHLHE41Q9C0J9 482 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 AKIRIN1Q9H9L7 192 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 WDR41Q9HAD4 459 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 C14orf105Q9NVL8 296 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 NXT1Q9UKK6 140 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 FBXW2Q9UKT8 454 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 MRPS33Q9Y291 106 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 PCDHGA6Q9Y5G7 932 aa10.46□□□□□ -0.73
CDK5RAP3-204ENST00000577664 MTORP42345 2549 aa10.46□□□□□ -0.74
CDK5RAP3-204ENST00000577664 IGKV3D-11A0A0A0MRZ8 115 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 MYO1GB0I1T2 1018 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 C21orf140B9A014 251 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 STMND1H3BQB6 276 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CLDN4O14493 209 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 KLF7O75840 302 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 GPR75O95800 540 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ZGLP1P0C6A0 271 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 NR2F6P10588 404 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 DCTP40126 519 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 XCR1P46094 333 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 POLR2JP52435 117 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PHC1P78364 1004 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 MC1RQ01726 317 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 RHAGQ02094 409 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 GABPB1Q06547 395 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 KRT72Q14CN4 511 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 MPEG1Q2M385 716 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 COQ5Q5HYK3 327 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 C1orf189Q5VU69 101 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 OR52E8Q6IFG1 317 aa10.45□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PAOXQ6QHF9 649 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms