RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SH3D21A4FU49 640 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 SMAD7O15105 426 aaKnown RBP8.25□□□□□ -1.09
SMG6-218ENST00000575454 CDH16O75309 829 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 TRIM3O75382 744 aaPredicted RBP8.25□□□□□ -1.09
SMG6-218ENST00000575454 ETHE1O95571 254 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 KRT14P02533 472 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 IGKV3-11P04433 115 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 TMIGD3P0DMS9 266 aaPredicted RBP8.25□□□□□ -1.09
SMG6-218ENST00000575454 CERS1P27544 350 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 GABRB3P28472 473 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 PCYT1AP49585 367 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 CDK9P50750 372 aaKnown RBP8.25□□□□□ -1.09
SMG6-218ENST00000575454 ZNF75DP51815 510 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 DIO3P55073 304 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 PLIN5Q00G26 463 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 GAB1Q13480 694 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 CRYMQ14894 314 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 HIST2H2ACQ16777 129 aaPredicted RBP8.25□□□□□ -1.09
SMG6-218ENST00000575454 PPP1R3AQ16821 1122 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 TMEM35AQ53FP2 167 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 PAGE2BQ5JRK9 111 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 SPANXN3Q5MJ09 141 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 HIST2H2AA3Q6FI13 130 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 FAM45BPQ6NSW5 357 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 SBSNQ6UWP8 590 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 YTHDF3Q7Z739 585 aaKnown RBP8.25□□□□□ -1.09
SMG6-218ENST00000575454 PACS2Q86VP3 889 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 OR10G3Q8NGC4 313 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 FAM45AQ8TCE6 357 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 ZPLD1Q8TCW7 415 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 DIO2Q92813 273 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 TANKQ92844 425 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 FBXL20Q96IG2 436 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 TM9SF2Q99805 663 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 PELOQ9BRX2 385 aaKnown RBP8.25□□□□□ -1.09
SMG6-218ENST00000575454 PIGMQ9H3S5 423 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 CNOT10Q9H9A5 744 aaKnown RBP8.25□□□□□ -1.09
SMG6-218ENST00000575454 MS4A12Q9NXJ0 267 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 GUCA1BQ9UMX6 200 aa8.25□□□□□ -1.09
SMG6-218ENST00000575454 GTF3C1Q12789 2109 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 OR6C76A6NM76 312 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 INAFM1C9JVW0 142 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 CLGNO14967 610 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 LDB3O75112 727 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 WDR47O94967 919 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 ACTL6AO96019 429 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 CYP4B1P13584 511 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 TLX1P31314 330 aaPredicted RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 TMED10P49755 219 aaKnown RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 AGFG1P52594 562 aaKnown RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 WNT3P56703 355 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 IGLV3-21P80748 117 aaPredicted RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 LAPTM5Q13571 262 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 POU4F3Q15319 338 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 ACKR1Q16570 336 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 NTRK2Q16620 822 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 AP5B1Q2VPB7 878 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 LYPD8Q6UX82 237 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 FRA10AC1Q70Z53 315 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 ADAMTSL2Q86TH1 951 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 C9orf40Q8IXQ3 194 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 CIARTQ8N365 385 aaPredicted RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 TCAIMQ8N3R3 496 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 ACOT4Q8N9L9 421 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 UCN3Q969E3 161 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 ABTB1Q969K4 478 aaPredicted RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 UBE2E3Q969T4 207 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 ANKRD9Q96BM1 317 aaPredicted RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 VPS39Q96JC1 886 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 CCL19Q99731 98 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 WDR83Q9BRX9 315 aaKnown RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 EFCAB11Q9BUY7 163 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 RBSNQ9H1K0 784 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 UBQLN3Q9H347 655 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 PROK2Q9HC23 129 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 PRM3Q9NNZ6 103 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 PPANQ9NQ55 473 aaKnown RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 PRDM7Q9NQW5 492 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 TRMT1Q9NXH9 659 aaKnown RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 GALNT8Q9NY28 637 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 ZNF226Q9NYT6 803 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 FETUBQ9UGM5 382 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 TRPS1Q9UHF7 1281 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 CNOT11Q9UKZ1 510 aaKnown RBP8.24□□□□□ -1.09
SMG6-218ENST00000575454 C15orf41Q9Y2V0 281 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 OARD1Q9Y530 152 aa8.24□□□□□ -1.09
SMG6-218ENST00000575454 MYOCOSA0A1B0GUC4 107 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 SCELO95171 688 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 RCBTB2O95199 551 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 ACSL3O95573 720 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 CPN1P15169 458 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 ALOX15P16050 662 aaPredicted RBP8.23□□□□□ -1.09
SMG6-218ENST00000575454 HIST1H1TP22492 207 aaPredicted RBP8.23□□□□□ -1.09
SMG6-218ENST00000575454 CPN2P22792 545 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 ATP5A1P25705 553 aaKnown RBP8.23□□□□□ -1.09
SMG6-218ENST00000575454 SERPINB1P30740 379 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 SLC6A12P48065 614 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 MASP1P48740 699 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 NRG3P56975 720 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms