RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ATP5A1P25705 553 aaKnown RBP22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 RXRGP48443 463 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 MASP1P48740 699 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 DGKEP52429 567 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 KIAA1024LP59773 190 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 TMEM35AQ53FP2 167 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 ZNF425Q6IV72 752 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 ZNF605Q86T29 641 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 RBM45Q8IUH3 476 aaKnown RBP22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 ZNF540Q8NDQ6 660 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 MSLNLQ96KJ4 702 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 CNDP2Q96KP4 475 aaKnown RBP22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 FUNDC2Q9BWH2 189 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 OR51I1Q9H343 314 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 FBRSQ9HAH7 460 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 ACSS1Q9NUB1 689 aaPredicted RBP22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 M0R129 80 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 FAM20BO75063 409 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 MFN2O95140 757 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 MT-ND2P03891 347 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 CMPK1P30085 196 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 TPMTP51580 245 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 RPS6KA3P51812 740 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 PRKAG1P54619 331 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 CCDC81Q6ZN84 652 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 NLGN4XQ8N0W4 816 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 KCT2Q8NC54 265 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 GTPBP3Q969Y2 492 aaKnown RBP22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 FKBP10Q96AY3 582 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 CNRIP1Q96F85 164 aaPredicted RBP22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 WDR92Q96MX6 357 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 ANKRA2Q9H9E1 313 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 ZCCHC3Q9NUD5 404 aaKnown RBP22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 TAS2R7Q9NYW3 318 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 COLEC10Q9Y6Z7 277 aa22.39■■□□□ 1.17
NPLOC4-217ENST00000574897 GADD45GO95257 159 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 AIFM1O95831 613 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 ITGA2P17301 1181 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 LIMS1P48059 325 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 NUP107P57740 925 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 TRA2BP62995 288 aaKnown RBP22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 ABATP80404 500 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 TUBA3CQ13748 450 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 COMTD1Q86VU5 262 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 CCDC116Q8IYX3 515 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 NATD1Q8N6N6 113 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 FLCNQ8NFG4 579 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 OR2L5Q8NG80 312 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 OR4D11Q8NGI4 311 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 VANGL1Q8TAA9 524 aaPredicted RBP22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 XAGE5Q8WWM1 108 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 TANKQ92844 425 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 DNASE1L2Q92874 299 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 KCNK12Q9HB15 430 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 TRPC4Q9UBN4 977 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 PCDHGA2Q9Y5H1 932 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 TRIM64BA6NI03 449 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 NME6O75414 186 aaPredicted RBP22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 IFNW1P05000 195 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 DRD2P14416 443 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 ITIH1P19827 911 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 FEN1P39748 380 aaKnown RBP22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 TMBIM6P55061 237 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 NFATC3Q12968 1075 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 MRM1Q6IN84 353 aaKnown RBP22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 USP30Q70CQ3 517 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 PARP8Q8N3A8 854 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 PSMA8Q8TAA3 256 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 FAM81AQ8TBF8 368 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 SLC35G5Q96KT7 338 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 BBS4Q96RK4 519 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 GDF15Q99988 308 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 SCML1Q9UN30 329 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 SLC6A14Q9UN76 642 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 TPRKBQ9Y3C4 175 aa22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 FAM32AQ9Y421 112 aaKnown RBP22.38■■□□□ 1.17
NPLOC4-217ENST00000574897 SLC28A2O43868 658 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 CCNA2P20248 432 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 AHRP35869 848 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 TJAP1Q5JTD0 557 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 SLC16A12Q6ZSM3 486 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 SFTPA2Q8IWL1 248 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 SUN3Q8TAQ9 357 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 ZNF764Q96H86 408 aaPredicted RBP22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 COL21A1Q96P44 957 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 AMBNQ9NP70 447 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 TMEM9Q9P0T7 183 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 CD207Q9UJ71 328 aa22.37■■□□□ 1.17
NPLOC4-217ENST00000574897 TCRBV21S2A2A0A5A6 115 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 NOL3O60936 208 aaKnown RBP22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 FADS2O95864 444 aaKnown RBP22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 BNIP3Q12983 259 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 AQP6Q13520 282 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 AHSA2Q719I0 299 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 VN1R4Q7Z5H5 301 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 LACC1Q8IV20 430 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 SLC30A8Q8IWU4 369 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 MFSD9Q8NBP5 474 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 PATE1Q8WXA2 126 aa22.36■■□□□ 1.17
NPLOC4-217ENST00000574897 FAIM2Q9BWQ8 316 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms